Qipengyuania spongiae: L1F33_10950
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Entry
L1F33_10950 CDS
T08950
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
qsp
Qipengyuania spongiae
Pathway
qsp03410
Base excision repair
qsp03430
Mismatch repair
qsp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
qsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
L1F33_10950 (recJ)
03430 Mismatch repair
L1F33_10950 (recJ)
03440 Homologous recombination
L1F33_10950 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
qsp03400
]
L1F33_10950 (recJ)
DNA repair and recombination proteins [BR:
qsp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
L1F33_10950 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
L1F33_10950 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
L1F33_10950 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
UVI38759
UniProt:
A0ABY5SX16
LinkDB
All DBs
Position
complement(2203722..2205506)
Genome browser
AA seq
594 aa
AA seq
DB search
MATRSSNAVFGIDRSLSGKRWRWRGGNMELGGGATLNHDIVTQLLLARGVAHDDLERHRE
PTLRAFLPDPSEFNDMDAAAERIAQAVLSGEGVTIYGDYDVDGATSSALLIRLFRMLGHD
AGHYIPDRLLEGYGPSGEALVRLGEEGSSLVVTVDCGAMAHEALQRAHDAGVDVIVVDHH
KCSPELPRTVALVNPNRLDENDLAAGHGHLAAVGVAFLLSVAIVRTLRKRGYFEQRKEPD
LFSLLDLVALGTVADVAALHGLNRAFVSQGLRVMARRANTGMAALIDASRLKRAPACSDL
GFALGPRINAGGRVGESTLGVRLLTTEDDEEARAIAAQLSHLNEERRAIEAEVQEAAEAM
IAAQHNRAVIVCAGSGWHPGVIGIVAGRIKEKTGKPSIVIAFDAETGQGKGSGRSIAGVD
LGAAIIAAREQGLLVAGGGHAMAAGLTVASDQVEALTGWLDERLHKQVTRASAAQETVLD
LAVAPGGLTPDLVEALEAGGPYGVGWPGPRVAVGPVRLVKCDVVGSDHLRVIAAGEDGRS
FKGIAFRAAESELGQQLLHVPAGRRLWLVGRAKIDDWGDLPRAELHLEDAAWAD
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggccacgcgcagctccaatgcagttttcggaatagatcgttcgctttcgggaaagagg
tggcgctggcgcggcggcaatatggaactgggcggcggcgcgacgcttaaccacgacatc
gtgacgcaattgctgctcgcgcgcggtgtcgcgcatgacgatctcgaacgtcaccgcgag
ccgaccttgcgcgccttcctgcccgacccttccgaattcaacgacatggatgcggcggca
gaacggatcgcgcaggccgtcctttcgggcgagggggtgacgatctacggcgattacgat
gtggacggggcgaccagttccgctctgctgatccgcttgttccgcatgctcggccacgat
gccgggcactacattcccgaccgcctgctcgaaggctacggcccctcgggcgaggctttg
gtccgcctgggcgaggaaggcagcagcctcgtcgtcaccgtcgattgcggcgcgatggcg
cacgaggcgttgcagcgcgcccatgatgcgggcgtggacgtgatcgtggtcgatcaccac
aagtgctcgccggagcttccgcgcacggtggcactggtcaatcccaaccggctcgacgag
aacgatctggcggccggccacgggcatctggccgccgtcggagtcgccttcctgctctcg
gtcgcgatcgtgcgtactttgcgcaagcgcggttatttcgagcagcgcaaggagcccgac
ctgttctcgctcctcgacctcgtggcgctgggcaccgtggccgatgtggcggcgctgcat
gggctcaaccgtgccttcgtgtcgcaggggctgagagtgatggcccggcgcgcgaacacc
ggcatggccgcgctgatcgacgcgagccggttgaagcgggctccggcgtgcagcgatctc
ggcttcgcgctcgggccacgaatcaacgccgggggacgcgtgggcgaatcgacgctgggc
gtccgcctgctgaccaccgaggatgacgaggaagcgcgcgcgatcgccgcgcagctatcg
cacctcaacgaggaacgccgcgcgatcgaggcggaggtgcaggaagcggccgaggcgatg
atcgccgcccagcacaaccgcgccgtcatcgtctgcgcgggcagcggctggcacccgggc
gtgatcgggatcgtcgccggccggatcaaggagaagaccggcaagccgtccatcgtgatc
gcgttcgatgccgagactggtcagggcaagggatcgggccgctcgatcgccggtgtcgat
ctcggcgcggcaatcatcgccgcgcgcgagcagggcctgctcgtcgcgggcggcggtcac
gccatggcggccggcctgaccgtggcctcagatcaggtcgaggcgctgacgggctggctc
gacgagcgcctgcacaaacaggtgacccgcgcttccgcggcgcaggaaaccgtgctcgac
ctcgcggttgcgccgggaggactgacgccggatctggtcgaggcgctcgaggcgggcggt
ccctatggggtcggttggccggggccgcgcgtggcggtgggtccggtgcggttggttaag
tgcgacgtggtcggcagcgatcacttgcgcgtcatcgccgcgggcgaggacgggcgcagc
ttcaagggtatcgcttttcgcgcggccgagagcgaactcggccagcaattgctgcacgtt
cccgccggccggcgcctgtggctggtcgggcgcgcgaagatcgacgactggggcgatctg
ccccgcgcggaactccatctggaagacgccgcctgggccgattga
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