Qipengyuania spongiae: L1F33_12935
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Entry
L1F33_12935 CDS
T08950
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
qsp
Qipengyuania spongiae
Brite
KEGG Orthology (KO) [BR:
qsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
qsp03400
]
L1F33_12935 (addB)
Enzymes [BR:
qsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L1F33_12935 (addB)
DNA repair and recombination proteins [BR:
qsp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
L1F33_12935 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
UVI39122
LinkDB
All DBs
Position
complement(2613693..2616737)
Genome browser
AA seq
1014 aa
AA seq
DB search
MADGAPEPQHPNVYSIAAHRGFADALVAGLVPRYRDADLGLARLTLLLPSSRAQRVMSEA
FIRHAGATGENGLLMPRMAVVGDLDLDEALGSLLDPLGASDIPPAVDPQRRLFALAGLIA
EEMGDDAPEGATLLRLARETGATMDRLLVEDIGPEQLVDEKVVGIFPDLSAHWQKSLRLF
AVVQAKWLAWLNANGVIDAAARRNRLFDHAARRWRAQPPETPIVAAGVTSAAPALARLLR
VVADLPQGAVILPDFNLGMAGEVWDELGRAGNRPTPDDTPFGRDDAVTHPQYHLKLLLNR
MGVAREEVQPWHRKGMTAAPPERSHAVSSVFLPPQASRAWVDLPAEKRRMAGVRVMQCAN
PEEEAQAIALLVRQALEEPERRVAVVTPDRALGRRVVHHLARWNVIADDSAGRPLSQTAA
GRAFLLAAEVTSEGARPVPVMALLGHPLVDGGMERGVWLRQLRRVERELRGPRLQPGLDP
LRVVAAKLAARHDRIAAWWDIAEQALEPLVAADPETPQALADLIDTIAAVCEQLCSDRIW
AREDGRALARFVEEFRQHAREADFAIAPRHLATALSDAMAQHAVRPPYGGHSRVQILGLL
EARMNRADLVICGGLNEGVWPARGSVDALLAPAILRTLGVPGADFRIGLAAHDLAGALGA
PEVVLSRAARDESGPAIPSRFLLRVQALLHDPRGREDLADRHRESTAVDWARAMFRAEPT
PAYPRPRPMPSSEQRDLDISATALDRLLGDPYQFYAQRILQLSDIDALDAEPDALWQGNV
AHKVLQLWHEARKNDPTARIRPIMEQVLAAEHADPLIRGLWQPRLEKALEWIEETVSAYD
DRTVLAVETKGEMQFDGVRVHGRADRIDRLPGGGLGIVDYKTGSPPSAAMVAEGFALQLG
ILGLIAERDGFDDLHGEPERYEYWSLGKAKSPDNPYGFGYVETPLRVGLKKTGLELDDFL
PETARFLREAIAKYIRGDAPFTARENPDYPAYDTYDQLMRLEEWLPHLDAENAQ
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
gtggctgacggcgcgccggaaccgcaacacccgaacgtctattcgattgccgcgcatcgc
ggtttcgccgatgcgctggtcgccgggctggtgccgcgttaccgcgatgccgatctgggt
cttgcgcgcctgaccctgcttctcccgagcagccgggcgcagcgggtgatgagcgaggcc
ttcatccgccatgccggtgcaaccggcgaaaacggcttgttgatgccgcgcatggcggtg
gtgggcgatctcgatctagacgaggcgctgggcagcctgctcgatccgctgggggcaagc
gacattcctccggcggtcgacccgcagcgccgcctgttcgcgctggccgggctcatcgcg
gaggaaatgggggacgatgcgccggagggtgccacactgctgcggctggcgcgcgaaacc
ggagcgacgatggaccgcctgctggtcgaggatatcggccccgaacagctggtcgacgag
aaggtcgtcggcatctttcccgatctttcggcgcactggcagaaatccctgcgcctgttc
gcggtggtccaagcgaaatggctcgcctggctaaacgcgaacggcgtgattgacgccgct
gcccggcgcaaccgtctgttcgaccacgcggcccggcgctggcgcgcgcagccgcccgaa
acgcccatcgtcgccgccggagtcaccagcgccgcgccggcgctcgctcggctgttgcgt
gtcgtcgcggacctgccgcagggcgcggtgatcctgcccgatttcaacctcggcatggca
ggcgaggtgtgggacgagcttggtcgtgcgggcaaccggccgacgcccgacgacacgcct
ttcggtcgcgacgatgcggtgactcatccacaataccatttgaagctgctgctcaaccgc
atgggcgtggcgcgcgaggaggtgcagccctggcaccgcaagggcatgaccgccgcgccg
cccgagcgcagccatgccgtctccagcgtgttcctgcctccgcaagcgagcagggcctgg
gtcgatctcccggcggagaagcggcggatggcgggggtccgcgtcatgcagtgcgccaat
ccggaggaggaggcgcaggcgatcgcgttgctggtgcgccaggcgctcgaggagccggaa
cggcgcgtcgcggtggtgacgcccgaccgcgcgctcggacggcgggtagtccatcatctc
gcccggtggaacgtgattgcagacgattcggcggggcgtcctctgtcgcagaccgcggcg
gggcgggccttcctgctggcggcggaggtgacgagcgagggcgcgcggccggtgccggtg
atggcgctgctcggccatccgctggtcgatggcgggatggagcgcggcgtctggctgcgg
caattgcgccgggtcgagcgcgaactgcgcgggccgcgtcttcagccggggctcgacccg
ctgcgggttgtcgcggcgaaactggccgcgcggcacgatcggatcgctgcctggtgggac
attgccgagcaggctctggagccgctcgtcgccgccgatccggaaacgccgcaggcgctg
gctgacctgatcgacacgatcgcggccgtgtgcgagcaactgtgttcggaccgcatctgg
gcccgcgaggacggccgtgccctcgcgcgcttcgtcgaggagttccgccagcacgcgcgc
gaggcggattttgcaatagcgccgcgtcaccttgctaccgcgctgtccgatgcgatggcg
cagcacgccgtgcgcccgccctatggcggtcattctcgggtgcagatcctcggcctgctc
gaggcgcggatgaaccgggccgaccttgtcatctgcggcggcctgaacgaaggcgtctgg
cccgcgcgcggttcggtcgacgcgctgctggcgcccgcgatcctgcgcacgctcggcgtg
ccgggagcggatttccgcatcggtcttgccgcgcacgatctggcgggagcgctgggcgcg
ccggaggtggtgctgagccgcgcggcgcgcgacgaaagcgggccagcgatcccctcgcgc
tttctcctgcgggtgcaggcgctgctgcacgatccgcgcggccgggaggatctcgccgac
cgccatcgcgaaagcacggcggtcgattgggcccgcgccatgttccgcgccgagccgacg
ccggcctatccgcgcccccggcccatgccgtcgtccgagcagcgcgatctcgacatatcg
gcgaccgcgctcgaccggctgctgggcgatccctaccagttctatgcccagcgcatcctg
caactttccgacatcgacgctctcgatgccgaaccggacgcgctgtggcagggcaatgtc
gcgcacaaggtgctccagctgtggcacgaggcgcgcaagaacgatcccaccgcgcgcatc
cggccgatcatggagcaggtgctcgctgccgagcacgccgatcccctgatccggggcctg
tggcagccgcggttggaaaaggcgctcgaatggatcgaggagactgtctctgcctatgac
gaccgcacggtgctcgcggtcgagaccaagggcgagatgcagttcgacggcgtgcgggtc
cacggccgggccgaccggatcgaccggctgcccggcggagggctggggatcgtcgactac
aagaccggatcgccgcccagcgccgcgatggtcgcggaaggtttcgcattgcagctcggc
attctcggcctgatcgccgaacgagacgggttcgacgatttgcacggcgagcctgaacgc
tacgagtactggtcgctcggcaaggccaaatctccggacaatccctacggcttcggttac
gtcgagacgccgctcagggtcgggttgaagaagaccggactcgaattggatgactttctg
cccgaaactgcccgattcctgcgcgaagcgatcgcaaaatacatccgcggcgacgcaccg
ttcaccgcgcgcgagaaccccgactacccggcctacgacacttacgatcagctgatgcgg
ctcgaggaatggctcccccatctcgatgcggagaacgcacagtga
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