Qipengyuania spongiae: L1F33_13140
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Entry
L1F33_13140 CDS
T08950
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
qsp
Qipengyuania spongiae
Brite
KEGG Orthology (KO) [BR:
qsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
qsp03032
]
L1F33_13140
03400 DNA repair and recombination proteins [BR:
qsp03400
]
L1F33_13140
Enzymes [BR:
qsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
L1F33_13140
DNA replication proteins [BR:
qsp03032
]
Prokaryotic type
DNA Topoisomerases
L1F33_13140
DNA repair and recombination proteins [BR:
qsp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
L1F33_13140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF7508
DUF4124
Motif
Other DBs
NCBI-ProteinID:
UVI39158
LinkDB
All DBs
Position
complement(2655309..2656310)
Genome browser
AA seq
333 aa
AA seq
DB search
MTKLIYVDDDLPGISRKRAGKGWAYYDAEGKLITERAEKQRLNAIALPPAYKDAWFCPAP
NGHILATGMDAKGRKQYRYHPEFRAARESEKFDKCLAFGSLLPLVRKRVESDLRGRKLTW
ERAVASVVRLLDLGAIRVGNEGYAVRNQSYGATTLRRRHAEVTGKTLKLRYKGKSGKMRE
VTLTDGSLARMVRNMQDLPGQNVFKYVDEDGTVHAVGSGDVNEYLEEAMGERFTAKNFRT
WHGSVLAFDCLRAGEGNVPMKELLSSVAGQLGNTPAVTRKSYIHPAVFELMGDQETWRAS
LKLPRATRWLTREERGLIEMLEECPGVGGLLAA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagctcatttacgtcgatgacgatctgcccggcatctctcgcaagagagcgggc
aagggatgggcgtattacgacgctgagggcaagctgatcaccgagcgggccgagaagcag
cggctgaacgccattgcgttgcctccggcttacaaggatgcctggttctgcccggcgccg
aacggccacatccttgcgaccgggatggatgcaaaaggacgcaagcagtaccgctaccat
cccgaattccgggcggcgcgggaaagcgagaagttcgacaagtgcctcgccttcggcagt
ctcctgcctctcgtgcgcaagcgcgtggaaagcgatcttcgcggccgcaagcttacctgg
gagcgcgctgtggcgagcgtggtgcgtctcctcgacctaggcgcgatccgggtcggcaac
gagggctatgcggttcgcaaccagagctatggcgcgaccaccctgcggcggcgccatgcc
gaggtgacgggcaagaccctgaaactgcgttacaagggcaagtcgggcaagatgcgcgag
gttacgctgaccgatggcagcctcgcgcggatggtccgcaacatgcaggatctgccgggg
cagaatgtcttcaagtatgtcgacgaggacggcacggtccacgccgtcgggtcgggggat
gtcaacgagtatctcgaagaggcgatgggcgagcgcttcaccgccaagaacttccgcacc
tggcacggtagcgtgctcgccttcgattgcctacgcgcgggcgagggcaatgttccgatg
aaggaactgttgtctagcgtcgccggacagctcggcaacacgccggcggtgacacgcaag
agctacatccatcctgcggtcttcgaactgatgggcgatcaggagacgtggagagcctcc
ttgaagcttcctcgcgcgactcgttggctcactcgggaggagcgcggacttatcgagatg
cttgaggagtgtccgggcgtcggcggcttactcgccgcgtaa
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