Qipengyuania spongiae: L1F33_13395
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Entry
L1F33_13395 CDS
T08950
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
qsp
Qipengyuania spongiae
Brite
KEGG Orthology (KO) [BR:
qsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
qsp03016
]
L1F33_13395 (truB)
Enzymes [BR:
qsp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
L1F33_13395 (truB)
Transfer RNA biogenesis [BR:
qsp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
L1F33_13395 (truB)
Prokaryotic type
L1F33_13395 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
UVI39206
LinkDB
All DBs
Position
complement(2707891..2708880)
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AA seq
329 aa
AA seq
DB search
MKPQLHGWLILDKPRGLGSTQAVGAVKRIMRQAGYPKTKVGHGGTLDPLAEGVLPIALGE
ATKLAGRMLDASKIYEFTIQFGEQTDTLDTEGEVIERSDRRPPMAAIPAMLDHFTGEIEQ
APPSYSAIKIDGRRAYDLARAGEEVDMKLRAVTVHSLALAGERSDAPIRSAFATSAGRPD
PYDPAAPLELADAVTLVAHVSKGTYIRSLARDIARALGTVGHVTYLRRVKAGPFAEERAI
SLDSFEETAKGAPLQDLLLPLEAGLDDIPALMLDPDSAQAVRQGRVLSDLPHPDGLHLAR
LDDVPVALVEITGGTAKVVRGFNLPDVAE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaccgcagcttcatggctggctgatcctcgacaagccgcgcggcctcggctcgacc
caggcggtgggcgcggtgaagcggatcatgcgccaggcgggctatccgaaaaccaaggtc
gggcacggcggcacgctcgacccgctggccgagggcgtgctgccgatcgcgctgggcgag
gcgaccaagctggccgggcggatgctcgatgcgagcaagatatacgagttcaccatccag
ttcggcgagcagaccgacacgctcgatacggagggcgaggtgatcgaacgcagcgaccgc
cgtccgcccatggccgcgatccccgccatgctcgaccatttcactggagagatcgagcag
gcgccgccctcctattcggcgatcaagatcgacggtcggcgcgcctatgatctcgcacgg
gcgggcgaagaggtcgacatgaaactgcgcgcggtgaccgtccattcgctcgcgctggcg
ggcgagcggtcggacgcaccgatccgctccgccttcgcgacctcggccgggcggcccgat
ccctacgaccctgccgcgccgctcgagcttgccgacgcggtgacgctggtcgcgcatgtc
tcgaagggcacgtatatccgcagccttgcacgggacatcgcgcgcgcccttggaacggtg
ggacacgtgacctatctcaggcgcgtgaaggcggggccctttgccgaggaacgggcgatt
tcgctggacagtttcgaggaaaccgctaagggcgcgccacttcaagacctactcctgccg
ctcgaggcggggctggacgacatcccggccctgatgctcgatcccgatagcgcgcaggcg
gtccgtcagggccgggtgctttcggatttgccccatcccgatgggcttcaccttgccagg
ctggacgatgttcccgtcgcgctcgtggagatcacgggaggcaccgccaaggtggtgcgg
ggtttcaaccttcccgatgtcgcggagtga
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