Qipengyuania spongiae: L1F33_14225
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Entry
L1F33_14225 CDS
T08950
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
qsp
Qipengyuania spongiae
Pathway
qsp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
qsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
L1F33_14225 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
qsp03400
]
L1F33_14225 (ruvB)
Enzymes [BR:
qsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L1F33_14225 (ruvB)
DNA repair and recombination proteins [BR:
qsp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
L1F33_14225 (ruvB)
RecFOR pathway proteins
L1F33_14225 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_16
AAA_3
AAA_14
AAA_22
Rad17
AAA_18
nSTAND3
AAA_17
TsaE
RNA_helicase
NB-ARC
Parvo_NS1
NTPase_1
AAA_33
AAA_28
Bac_DnaA
AAA_24
ABC_tran
NACHT
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
UVI39363
LinkDB
All DBs
Position
complement(2859574..2860608)
Genome browser
AA seq
344 aa
AA seq
DB search
MVDPVPLHTPARQPDDPDSALRPKSLGEFVGQKAARENLRVFVDAARSRGEAMDHVLFFG
PPGLGKTTLAQIVAKELGVGFRATSGPVIAKAGDLAALLTNLEPNDVLFIDEIHRLNPVV
EEVLYPAMEDRALDIIIGEGPSARSVRIDLPPFTLVGATTRQGLLTTPLRDRFGIPVRLS
FYTEDELLRVVTRGAGLLGMAIDEGGAREIARRSRGTPRVAGRLMRRVRDFAHVLGQGTV
TARVADEALTRLEVDSLGLDAMDRRYLTMIATTYKGGPVGVETLAAGLSEPRDTVEEVIE
PYLIQLGLIARTARGRCLNDVGWRHLGMSGPVAGRQEGLFDEEG
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggtcgaccccgtccctctccacacgcccgcccgtcagccggacgaccccgactcggcg
ttgcggcccaaatcgctcggcgagttcgtcgggcagaaggcggcgcgcgagaacttgcgg
gtcttcgtcgatgcggcaaggtcgcgaggtgaggcgatggaccatgtgctgttcttcggc
ccccccggcctcgggaagaccacgctcgcgcagatcgtcgccaaggagctcggcgtcggc
ttccgtgccacaagcggtccggtgatagcgaaggctggcgatcttgccgcgctgcttacc
aatctcgagcccaacgacgtcctcttcatcgacgagatacaccgcctcaacccggtggtg
gaggaagtgctctatccggcgatggaggaccgcgcgctcgacatcatcatcggcgagggg
ccttcggcgcgcagcgtgcggatcgatttgccgcccttcactctggtcggtgcgacgacg
cggcagggcctgctgacgacgccgctgcgcgatcgcttcggcattcccgtgcgcctgagc
ttctacaccgaggacgagctgctgcgcgtcgtcacgcgcggggcgggcctgctcggcatg
gccatcgacgagggcggggcgcgcgagatcgcccgacgttcacgcgggacgccgcgcgtt
gccggacgactgatgcgccgggtgcgggacttcgcccatgtgctcggccaaggcacggtg
acagcccgcgtggcggacgaggcgctgacccggctcgaggtggattcgctcgggcttgat
gcgatggaccggcgctatctcaccatgatcgcgaccacctacaagggcgggccggtgggt
gtggagacgctcgcggccggcctgtccgagccgcgcgacacggtggaggaggtgatcgaa
ccctatctcatccagctcggcctgatcgcgcggaccgcgcgcgggcgctgcctcaacgac
gttggatggcggcatctggggatgtccggccccgtcgccgggcggcaggaaggtctgttc
gacgaggagggctga
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