Qipengyuania spongiae: L1F33_14380
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Entry
L1F33_14380 CDS
T08950
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
qsp
Qipengyuania spongiae
Pathway
qsp00521
Streptomycin biosynthesis
qsp00523
Polyketide sugar unit biosynthesis
qsp00525
Acarbose and validamycin biosynthesis
qsp00541
Biosynthesis of various nucleotide sugars
qsp01100
Metabolic pathways
qsp01110
Biosynthesis of secondary metabolites
qsp01250
Biosynthesis of nucleotide sugars
Module
qsp_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
qsp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
L1F33_14380 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
L1F33_14380 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
L1F33_14380 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
L1F33_14380 (rfbB)
00525 Acarbose and validamycin biosynthesis
L1F33_14380 (rfbB)
Enzymes [BR:
qsp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
L1F33_14380 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
adh_short
NAD_binding_10
KR
Motif
Other DBs
NCBI-ProteinID:
UVI40842
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All DBs
Position
unnamed:complement(4411..5463)
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AA seq
350 aa
AA seq
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MRIFVTGGAGFIGSALIRHLITDTAHEVLNFDALTYAGTLTAVESVAHSDRYRFVKGDIR
DSDQIRTALTDFRPDVITHLAAESHVDRSIDGPGAFIETNLVGTYSLLTEARRYWQELDD
TARGAFRFHHISTDEVYGSLGETGLFTEETPYDPRSPYSASKAGSDHLVSAWGHTFGLPV
LITNCSNNYGPYHFPEKLIPLVIAKALDGEPLPIYGKGDQVRDWLYVEDHVRALRTVFEA
GEPGRSYNIGGHNEKQNIEVVRAICAHLDELAPRADGKPYTDQITHVADRPGHDMRYAID
ATRIGEELNWKPLETFESGIRKTIEWYLANEAWWRPLVMAKAAERRGVAG
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgcgtattttcgtcaccggcggtgctggcttcatcggctcggcccttatccggcacctc
atcaccgacaccgcgcacgaagtgcttaatttcgacgccctgacctatgctggcacactg
acggcagtcgaaagcgtggctcacagcgaccgctatcgcttcgttaagggtgatatccgc
gacagtgatcaaatccgcactgcgcttaccgatttccgccccgatgtgatcacccatctg
gccgccgaaagccatgttgaccggtcgatcgacggacccggtgcatttatcgaaaccaat
ctggtcggcacctacagcttactgaccgaagcgcgccgttattggcaggaattagatgat
accgcacgtggcgcctttcgtttccaccacatctccaccgacgaggtctatggaagcttg
ggcgaaactggcctttttaccgaggaaacgccttacgatccacggtcgccctattcggcg
tctaaagcaggctccgatcatctggtgtccgcttgggggcacactttcggtttgccggtg
ctgatcaccaattgctccaacaattacgggccctatcacttccctgaaaagctcattccg
ctggtcatcgccaaggccttggatggcgagccgctgccgatctacggcaagggtgaccaa
gtgcgcgattggctctatgtcgaagatcatgtgcgcgcccttcgcaccgtgttcgaagca
ggcgaaccgggccgcagctacaatattggcggccacaacgagaaacaaaatatcgaagtt
gtacgtgccatctgcgcccatctcgacgaactggcgccgcgcgccgacggcaaaccctat
accgaccagatcacccatgtcgcggaccgacccggccatgacatgcggtacgccattgat
gccacgaggatcggcgaagaactgaactggaaaccgctggaaaccttcgaaagcggtatc
cgcaagacgatcgaatggtatcttgcaaacgaagcctggtggcgtccgctggtgatggcc
aaggcggccgagcgacgcggtgttgcaggctga
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