Quercus suber (cork oak): 111984261
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Entry
111984261 CDS
T05868
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized WD repeat-containing protein C17D11.16
KO
K14791
periodic tryptophan protein 1
Organism
qsu
Quercus suber (cork oak)
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
qsu03009
]
111984261
Ribosome biogenesis [BR:
qsu03009
]
Eukaryotic type
90S particles
Other 90S particles
111984261
Pre-60S particles
Other pre-60S particles
111984261
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WD40_RFWD3
Beta-prop_EIPR1
WDR55
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_WDR35_TULP_N
Beta-prop_SCAP
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_HPS5
WD_LRWD1
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_DCAF12
Beta-prop_IFT122_1st
Beta-prop_WDR75_2nd
WDR54
Beta-prop_SPT8
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
111984261
NCBI-ProteinID:
XP_065629102
LinkDB
All DBs
Position
Unknown
AA seq
494 aa
AA seq
DB search
MISSISWLPKGAANPVPAVADPPSKEEIDEIVKSAAFDKNGHSDNEDGDEDMDDGASNEA
GEVAQALEVADALGRTSNTAKSGTSFDSITDGLRELDMENYDEEDDGIELFSTGFGDLYY
QSNDMDPYLKDKSDDDSEEVEDMTINPTDAVLVCAHSGDEVSQLEVWIYEESDDGDSNMY
VHHDIIISANPLCTAWLDCPLKGGEKGNFIAVGSMEPSIEIWDLDIIDEVQPCVVLGGIA
ERKEKKNKISVKYKKDSHKGPVLGLAWNKEYRNILASASADKRVKIWDVATGKCDITMEH
HTDKVQAVAWNHHAPRVILSGSFDRSVVMKDGRXPEHSGYKWSVTADVESLAWDPHNQNL
FVVSLEDGTVQGFDVRAAKSDATSELKPSFTLHAHDKAVCTVSYNPSAPNLLATGSEDKM
VKLWDLSNNQPSCVASTNPKVGAIFSMSFSEDSPFLLAMGGSKGKLKVWDVLTDDRVHQR
FGNYIKRKIPQSGS
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgatatcatcaatttcttggttacccaaaggcgcagccaaccctgtacccgccgtagca
gaccctccctccaaggaagaaatcgacgagatcgtcaagtccgccgcttttgacaaaaat
ggacatagtgacaatgaggacggtgatgaagatatggatgatggtgcatccaatgaggct
ggtgaagttgcccaggcattagaggtagcagatgcacttggcagaacttccaatactgca
aagtcagggactagttttgatagcataactgatggtttgagggaacttgacatggaaaat
tatgatgaagaagatgatggcattgagttatttagcacggggtttggagacctttactac
caaagtaatgacatggatccatatctaaaagataagagtgacgatgactctgaagaggtt
gaggacatgactattaatccaactgatgctgtcctagtttgtgcacatagtggggatgaa
gtcagtcagcttgaggtttggatatatgaggaatctgatgatggtgattcaaacatgtat
gttcaccatgatatcatcatttcagcaaatcctctttgtaccgcatggctagattgtcca
cttaaaggtggagaaaaagggaattttattgctgttggctcaatggaaccctctatcgaa
atatgggatcttgacattattgatgaagtacaaccatgtgtggtgctgggtggcattgct
gagaggaaggagaaaaaaaataagatatcagtcaagtacaaaaaagacagtcacaaaggt
cccgtgcttggccttgcttggaacaaggagtacaggaatatacttgctagtgcaagtgct
gacaaacgagttaagatttgggatgtggctactggaaaatgtgatattaccatggagcat
catacggacaaggttcaagcagttgcatggaatcatcatgcaccacgagttattcttagt
ggatctttcgatcgttcagtagtcatgaaggatggtagantgccagagcattctggttat
aaatggtcagtcacagctgatgtagaaagcttggcatgggatccacacaaccaaaactta
tttgtggtgagtcttgaagatggtactgtccagggttttgatgtccgggcagccaagtct
gatgcaacttctgagttaaaacctagttttactctccatgcacatgacaaagccgtttgc
acagtctcctataatccttcagcacccaatcttcttgcaactggatccgaggataaaatg
gtaaagctttgggatctatcaaacaatcaaccttcatgtgttgcatccacaaatcctaaa
gtaggagctatattttccatgtccttctcagaggacagcccgtttttgctggctatggga
ggctctaaggggaaattgaaagtatgggacgtattaactgatgatagggtccatcaaaga
tttgggaactatatcaagcggaagatacctcaatctggctcttga
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