KEGG   Quercus suber (cork oak): 111984330
Entry
111984330         CDS       T05868                                 
Name
(RefSeq) protein transport protein SEC13 homolog B
  KO
K14004  protein transport protein SEC13
Organism
qsu  Quercus suber (cork oak)
Pathway
qsu03013  Nucleocytoplasmic transport
qsu04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:qsu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    111984330
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    111984330
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:qsu03019]
    111984330
   04131 Membrane trafficking [BR:qsu04131]
    111984330
Messenger RNA biogenesis [BR:qsu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     111984330
Membrane trafficking [BR:qsu04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    111984330
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    111984330
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    111984330
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_Prp19 Beta-prop_CAF1B_HIR1 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR35_TULP_N Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd ANAPC4_WD40 Beta-prop_RIG_2nd WDR55 Beta-prop_Vps41 WD40_Gbeta Beta-prop_EIPR1 Beta-prop_IFT122_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR41 Beta-prop_HPS5 Beta-prop_SCAP RMC1_N
Other DBs
NCBI-GeneID: 111984330
NCBI-ProteinID: XP_023871727
LinkDB
Position
Unknown
AA seq 301 aa
MPSQKIETGHQDVVHDVAMDYYGKRVATASSDHSIKITGVSNTASQQLATLTGHQGPVWQ
VAWAHPKFGSLLASCSYDGQVIIWREGNPNEWTQAHVFNDHKSSVNSVAWAPHELGLCLA
CGSSDGNISVFTARPDGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGLLDPVQKLCS
GGCDNTVKVWKLYNGTWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGKVIIW
TVAKEGDQWEGKVLNDFKTPVWRVSWSLTGNILAVADGNNSVTLWKEAVDGEWQQVTTVE
P
NT seq 906 nt   +upstreamnt  +downstreamnt
atgccttcacaaaagattgaaactggtcaccaagatgtggtccatgatgtagccatggat
tactatggcaagcgtgttgccacggcctcatcagaccactccattaagataactggggtg
agcaatacggcctctcagcagcttgcaacgttaactggtcaccaaggacctgtttggcag
gtggcatgggctcacccaaaatttgggtctttacttgcttcatgttcttatgatgggcag
gtgataatatggagggagggtaatccaaatgagtggacccaagcccatgtcttcaatgac
cacaagtcatctgtcaattctgttgcttgggctcctcatgaactgggactttgtttggca
tgtggttcctcagatgggaatatctcagttttcactgcaagaccggatggtggttgggac
acctcaaggatcgaccaggctcacccagttggtgtcacatctgtttcatgggctccctca
acagctcccggggctcttgttggttctggcttgcttgatcctgttcagaagctctgctca
ggtggttgtgataatactgtgaaggtgtggaagctctataatgggacatggaagatggat
tgctttccagctcttcagatgcatacagattgggttcgtgatgttgcctgggcacctaac
ttgggacttccgaaatctacaattgcaagtgcctcacaggatggcaaagtcatcatatgg
actgtggccaaggagggggatcaatgggaaggcaaggttctgaatgatttcaagactcct
gtttggagggtctcctggtcgctaacaggaaacatattggctgtggctgatggaaacaac
agtgtgacattgtggaaggaagctgttgatggggagtggcaacaggtgaccacagttgag
ccttag

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