Quercus suber (cork oak): 111984682
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Entry
111984682 CDS
T05868
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein NUP98A-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111984682
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsu03019
]
111984682
03036 Chromosome and associated proteins [BR:
qsu03036
]
111984682
Messenger RNA biogenesis [BR:
qsu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
111984682
Chromosome and associated proteins [BR:
qsu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
111984682
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
111984682
NCBI-ProteinID:
XP_065617224
LinkDB
All DBs
Position
Unknown
AA seq
772 aa
AA seq
DB search
MITPAFAVMSTPAFTVMSTPTFSSTSPARIEVIVSSVPVFRSDGAFGATSSPIFGSSSTS
ILGSSSTNTFGVSSTPTCGALSTPAFVSSSVPSFSVGSTLDFGQSTPAISAASIPTFGVM
STLAFSVTSTPTFSSTASPAFFVSITPVFGSSGAIEASSSPIFGSSSTSMFGSSSTPTFG
ASSMPTLGVPTIPAFGSLSASAFGASSSPSFTVGSTSAVGQSTSAFGCSPFGTTATPFGA
QNSPFGAQTKTLTFGSTSFGKLPFCSQCWGSRVAAYTPTTEVCNDTPTNEKLESISAMPV
YKDKTHEELRWEDYQLGGKGGPAMTTSAFSATCTPRSLTFISTETPTFCSIGIAFGVSSA
PVFGSGRAFGGSSTPTFGALSMPTFAATSTPAFGTTATPAFGSQGTTFGVQSAPAFGSGG
AFGASSSPISSSSGTPAFGASSMTAFSVSSTPALGTLTTPAXGTSTTPAFGASNAPSFSF
GSTSAFGSSPFGTTTTPFGAQSSPFGAQPTTTFCSTGFGLGSKREGSRIAAYTPTSEADG
CAQAELESISAMPEYKDKSHEELRWEDHQLGDKGRPLHLPAGGICFGLSPSPTYGQSAAS
PSLGGLTFAGSATPTFSSSPFSMSTSSNLFGSTSSSTTNVFGFSSSPSIFGSPSSLFNSG
PSQATNPAFGSYTQSSPLFQSSTPAIRQTGSTFGQTTSLGQSTSSPVGRGIXSASSTGFR
FLYSVSTAPKEAPIPLPNQATDTIVDAPAQEEVKARVKVQEPLGKLKSDIIY
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgatcacccctgcctttgccgtaatgagcacccctgcctttaccgttatgagcacccca
acctttagttcaacaagtcctgcaaggattgaagtcattgtgtcgagtgtccctgtattt
agatctgatggagcatttggagctacaagcagtcctatattcggttcatccagtacttct
atattgggttcttcaagcactaatacgtttggtgtctcaagcacaccaacatgtggtgcc
ttaagtactcctgcttttgtgtcttctagtgtcccttccttcagtgttgggtccacttta
gattttggccaatcaactcctgcaattagtgccgcaagcatacctacatttggtgttatg
agcacccttgcctttagtgttacaagcaccccaacctttagttcaacagcaagtcctgca
ttctttgtgtcaattacccctgtatttggttctagtggagcaattgaagcttcaagcagc
cctatatttggttcatctagtacttctatgtttggttcgtcaagcactcctacatttggt
gcctcaagcatgccaacacttggtgtcccaactattcctgcatttggttccttaagtgct
tctgcttttggggcttctagttccccatctttcaccgttggttccacttcagctgttggc
caatcaacttctgcatttggttgcagcccatttggtaccactgccactccttttggagct
cagaattctccttttggagcccagactaaaacgctaacatttggtagcactagctttggg
aagttgcctttttgcagtcaatgttggggaagtagagtagctgcatacactccaacaact
gaagtttgtaatgatacaccgactaatgagaagttagagtcaatatcagccatgcctgtc
tacaaagataaaactcatgaggagctgagatgggaggactatcaattgggaggtaaaggt
ggaccagctatgaccacctctgcctttagtgctacatgcacccctaggtccctaaccttt
atttcaacagaaactcctacattttgtagcatagggattgcatttggtgtgtcaagtgcc
cctgtatttggatctggcagagcatttggaggttcaagcacacctacatttggtgccttg
agcatgcctacatttgctgctacgagcaccccagcctttggtacaacagcaactcctgca
tttggtagccaagggacgacatttggtgtgcaaagtgcccctgcatttggatctggtgga
gcatttggagcttcaagcagtcctatatctagttcttcaggcacccctgcatttggtgcg
tcaagcatgactgcatttagtgtctcaagcacgcctgcgcttggtaccttaactactcct
gcanntggtacctcaactacacctgcttttggggcttcaaatgcaccatccttcagcttt
gggtccacttcagcatttggtagcagcccatttggtaccaccactactccatttggagcc
cagagttctccctttggagctcaacctacaacaacattttgtagcactggctttgggctt
gggagtaaacgtgagggaagtagaatagctgcgtacactccaacatccgaagcagacggc
tgtgcacaggcagaattagaatcaatatcagccatgcctgaatacaaagataaaagtcat
gaggagctgagatgggaggaccatcaattgggagataaaggtagaccacttcatcttcct
gctggtgggatttgctttggtttgtctccctcaccaacatatggccaatcagctgcaagt
cctagccttggtggtttaacttttgcagggtcagctactcctacgttcagttcttcacct
tttagcatgtcaacttcatccaacctttttggatcaacatcatcatcaacaacaaatgta
tttggatttagttcatctccatctatttttggttcaccatcatctctcttcaactctggt
ccatctcaggcaacaaatccagcatttggtagttacactcagtcatccccactattccaa
tcatctacacctgcaatcaggcagacaggctctacttttggacagacaacttcccttggg
cagagtacaagttcacccgttggtcgaggaatcnntagtgcttcctctactggatttaga
tttctttactcagtttctactgctcccaaagaggcgcctatccctctgcccaaccaagcc
accgacaccatcgtagatgcacctgcacaagaggaagttaaggctagagttaaggtacag
gaacctcttggtaagctgaagtcagatatcatatactga
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