Quercus suber (cork oak): 111984876
Help
Entry
111984876 CDS
T05868
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase DEAH13
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
qsu
Quercus suber (cork oak)
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
qsu03009
]
111984876
Enzymes [BR:
qsu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111984876
Ribosome biogenesis [BR:
qsu03009
]
Eukaryotic type
90S particles
Helicases
111984876
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHX37_C
OB_NTP_bind
Helicase_C
HA2_N
HA2_C
DEAD
AAA_22
nSTAND3
ATPase
ResIII
AAA_23
Motif
Other DBs
NCBI-GeneID:
111984876
NCBI-ProteinID:
XP_023872273
LinkDB
All DBs
Position
Unknown
AA seq
1330 aa
AA seq
DB search
MEVSVENLPESNSRKRSWSLEGCDCNALILPDKKKNKKREKVVVEKKPKLSNSQKRKLRK
LEEEKEKTLLLSKSIETLEKYKLPENAFPLLQSVQDIGQPETMKEKRRRAVQFSNAGLEV
PGSSEPFKRKGDDDDAVGTGPEIDEIPSGQDFSEDDSLQPLIVEREALKNASFSLESSQG
PVYGNENSGSIVGLQAEEVFKKDNSTSMQKDGNLDSLPGSCIDDGSESSRLMDKEDESQK
ASYRSTINLQGFPVQRPQIAPTVVHVSRPNEVQNTRKDLPIVMMEQEIMEAINDHASVII
CGETGCGKTTQVPQFLYEAGFGSSQLGGKSGIIGVTQPRRVAVLATAKRVAYELGLHLGK
EVGFQVRYDKKIGDSCSIKFMTDGILLREVQNDFLLKRYSVIILDEAHERSLNTDILIGM
LSRIIRIRQHEYEKQQQIVHSGQNVSPENMIYPLKLXLMSATLRVEDFISGRRIFHDPPP
VIEVPTRQFPVTIHFSKRTEIVDYIGQAYKKVLAIHKRLPQGGILVFVTGQREVNHLCQE
LRKASKKLIMKNLRGDAENDGTAVSDINFVEDINMKDISEAFEVDGNSVHQYSDRFSSYE
EDECDIDEDHFDDSYDSETESELEFDVDDGEASHQTIQEGDHSLVDILGEDASLASLKAA
FESLAGKTALNSVSDGKQALPVSPEGCLDQSTSTGKKKGGDNGFCAGELSVLPLYAKLSA
ADQLRVFKDVKEGERLVVVATNVAETSITIPGVKYVVDTGREKVKIYNTTNGMETYDIQW
ISKASAAQRAGRAGRTGPGHCYRLYSSAVFTNTLPDFSLAQISKTPVDGVVLLMKSMSID
KVQNFPFPTPPNTKALVEAEHCLKALEALDKNGKLTPLGKAMARFPMSPRHSRMLLTVIQ
TMRMVKSYARANLVLGYAVAAAAALSLSNPFVMELEGHTNKDDIEQDEKSGTLDSEKVID
KQEKLRRKKLKEIAKVSRAKFSNPSSDALTIARALQCFELSGSPVEFCNDNALHLKSMEE
MSNLRRQLLQLVFEKGLCGTEQDFSWIHGTPEDIEHAWRVSFNKPPLLLNEEELLGQAIC
AGWADRVAKRIRGVSRPSEGDQKAHAVRYQSCMVKETVFLHHWSSVSSSAPEFLVYSELI
HTKRPYMHGVTSVKSEWLVKHARSLCTFSQALTDPKPYYEPHTDKVFCYVIPTFGPHLWE
LPLHSLPITDNVQRVAVFAYALLEGKVLPCIKSVRKFMAAPPSCILRPEASGQKRVGNLL
NKLKTKLINSCAMLREAWIENPMELHSEILDWFQESFHNHFEVLWSQMHTEVLLEPEERF
PKSRTVKRKK
NT seq
3993 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgtctgttgaaaatttgccagaatcgaatagtagaaaacgttcatggagtttg
gaaggttgcgattgcaatgcattaatcttgccggataagaaaaagaataaaaagcgcgaa
aaggttgtagtggaaaagaaaccgaagctgagcaactctcaaaagagaaagctaaggaag
ttggaggaggagaaggagaaaacacttcttctgtcaaaaagcatcgagaccttagaaaag
tacaagcttccggagaatgcgtttcctcttttgcagtctgtacaagatattggtcagcct
gaaaccatgaaggaaaaacgtaggagggctgtacaattttctaacgctggattagaagtt
ccagggagcagcgagccattcaagaggaagggtgatgatgatgatgctgttggaactgga
cccgagatagatgaaattccatcagggcaggatttcagtgaggatgactcattgcaacca
ttgatagtagaaagagaagccctaaagaatgcatctttttctttggaatcatctcaaggg
ccagtttatggcaatgaaaatagtggatccattgttggcttacaagctgaagaagttttt
aaaaaagataacagcacttctatgcaaaaagatggaaatctagattctttgcccggttca
tgcatagatgatggcagtgaaagctctaggttaatggataaggaagatgagagccaaaag
gccagctacagaagtacaatcaatctacaaggttttcctgtgcagagacctcaaattgcc
ccaactgtagtgcacgtttctaggcccaatgaggttcagaacactaggaaggatcttcca
atagtcatgatggagcaggagataatggaagctataaatgatcatgcctctgttatcata
tgtggagagactgggtgtggtaaaaccactcaagttccgcagtttctttatgaagctggc
tttggttcaagccagttgggtggtaaaagtggtattattggagttactcaaccacgtcgt
gttgctgtccttgccacagccaagcgagtggcatatgagcttggtctccatctaggtaaa
gaggttgggtttcaagttaggtatgacaagaagattggagacagttgctcgatcaagttc
atgacagatggaattttactacgagaagttcagaatgattttttgttgaagcgttattct
gtcataattcttgatgaggctcatgagagaagcttgaacacagacattctaattggaatg
ctttcacgtataattagaatccgtcagcatgaatatgagaagcagcaacagattgttcat
tcagggcaaaatgtaagtccggaaaatatgatttatcctttaaaactgntgctgatgagt
gccaccttgcgagtggaagactttatttctgggagaagaatatttcatgatcctccacct
gttatagaggttcccactagacagtttccagtaactatacacttttcaaagagaacagag
attgtggattacattggccaagcatataaaaaggtcttggcaattcacaagaggttgcca
caggggggcatacttgtatttgttactggccagcgggaagtcaatcacttgtgtcaggag
ctacgtaaagcttcaaagaagctgattatgaaaaatttgaggggtgatgcagaaaatgat
ggcactgcagtctctgacataaattttgttgaggacataaatatgaaggatattagtgaa
gcatttgaagttgatggaaattcagttcaccagtattctgacaggtttagctcttatgag
gaagatgagtgtgatatagatgaggatcattttgatgattcatatgattcggaaactgag
agtgaactggaatttgatgttgatgatggggaagcatcacatcagacaattcaagagggt
gatcatagtcttgtagacattttaggggaggatgcgagccttgcttcgctaaaggctgct
tttgaatctttggctggaaaaactgcattaaactctgtttctgatggcaaacaggctctt
cctgttagtccagaaggatgcttagaccaatccactagcacagggaagaaaaagggagga
gacaatggtttctgtgctggtgaattgagtgttctgcctctttatgccaagctgtctgcc
gcagaccagcttcgtgtttttaaagatgtcaaggaaggagagaggcttgttgttgttgcc
acaaatgtggctgaaacctctataaccatcccaggcgtaaaatatgtggttgatactgga
agagaaaaagtgaagatctacaataccaccaatggcatggaaacatatgatatacagtgg
ataagcaaggcatctgctgctcaacgcgcaggaagagctggaagaactgggcctggccac
tgttaccgtctctactcttctgcagtttttaccaatacacttcctgacttttctcttgct
caaatatctaaaacgcctgttgacggtgtcgtccttcttatgaaatccatgagtattgat
aaggttcaaaactttccgtttccaactcctcccaataccaaagcgttggttgaagcagag
cattgcttgaaggctcttgaagcacttgataaaaatggaaaattgacacccttagggaag
gccatggctcgttttcccatgagtccacgccactccaggatgctccttactgttattcaa
actatgaggatggtgaaaagttatgctcgtgcaaatctggttctaggatatgcagttgca
gcagctgcagctttgagtttgtcaaatccatttgtcatggagcttgaaggacacactaat
aaagatgacatagagcaggatgagaaatccggtaccctagatagtgagaaagtcattgac
aagcaagaaaaattgaggagaaagaaactgaaagaaattgcaaaagtgtcgcgtgctaaa
ttttccaaccctagcagtgatgctctgaccatagcacgtgctttgcagtgttttgagctt
tctggaagcccagtggaattctgcaatgacaatgcattacacctgaaaagcatggaggaa
atgtccaatctgcgaaggcagctacttcaactggtctttgaaaaaggcctttgtggcact
gagcaggatttctcatggattcatggaactccagaggacatagagcatgcttggagggtt
tccttcaataaaccccctctcttactgaatgaggaagagctcttaggccaagctatctgt
gctggatgggcagatagggttgccaaacgcattcgaggagtttcaagaccgtctgaaggg
gaccaaaaggcacatgctgttcggtatcaatcttgtatggtaaaagaaaccgtcttcctg
catcattggtcatctgtttctagttcggcccctgagttcttggtttacagtgaattgata
cacacaaaacgaccatacatgcacggtgtgactagtgtaaaatcagagtggcttgttaaa
catgctcggtctttgtgtacattctcccaggcccttacagatcccaagccttactatgag
cctcatactgacaaagtattctgttacgtcattcctacttttgggcctcatttatgggaa
cttcccttgcatagtttgccaatcacagataatgtgcaacgagttgcggtgtttgcttat
gcattgcttgaaggcaaagtattaccatgcataaaatctgttcgtaagtttatggcagcc
cctcctagttgcattttgaggccagaggcatcaggtcaaaaaagggtaggaaatctttta
aacaagttaaagactaaattaattaatagctgtgctatgttaagagaggcttggatagag
aatcctatggaattgcattcagaaattctggactggtttcaggagagtttccacaatcat
ttcgaagtgctttggtcacaaatgcacactgaagttcttttagagcctgaagaacgcttt
cccaaaagtagaacagttaaaagaaagaagtaa
DBGET
integrated database retrieval system
