Quercus suber (cork oak): 111985253
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Entry
111985253 CDS
T05868
Name
(RefSeq) WD-40 repeat-containing protein MSI4
KO
K10752
histone-binding protein RBBP4
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu03082
ATP-dependent chromatin remodeling
qsu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111985253
03083 Polycomb repressive complex
111985253
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
qsu03036
]
111985253
Chromosome and associated proteins [BR:
qsu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
111985253
Histone modification proteins
HAT complexes
HATB complex
111985253
HDAC complexes
Sin3A-HDAC complex
111985253
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
111985253
PRC2.2
111985253
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
111985253
Heterochromatin formation proteins
Other heterochromatin formation proteins
111985253
Chromatin remodeling factors
NuRD complex
111985253
NuRF complex
111985253
NuRF complex (fruit fly)
111985253
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
eIF2A
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_WDR35_TULP_N
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
111985253
NCBI-ProteinID:
XP_065639153
LinkDB
All DBs
Position
Unknown
AA seq
463 aa
AA seq
DB search
MKERGKGTEPSVDERYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLY
LSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKFKTIIHPGEVNRIRE
LPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPTE
PFVLSGGKDKSVVLWSIHDHISTLAADTGATKSPGSGGSSAKHASKAGGTNDKPADSPSI
GPRGVYQGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARVGSSPVVKVEKAHDADLHC
VDWNPHDVNFILTGSADATVRMFDRRNLTSGGVGSPVHKFEGHNAAVLCVQWSPDKSSVF
GSSAEDGILNIWDHEKVGNVGSKMQNVPPGLFFRHAGHRDKVVDFHWNASDPWTIVSVSD
DCESTGGGGTLQIWRMIDLIYRPEEEVLAELDSFKSHILTCSS
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagagagggaaaggaacagagccatcagtggatgagaggtacactcaatggaaa
tcgctggtgccagtgctctacgactggctcgccaatcacaacctcgtttggccttctctc
tcttgccgatggggtccgcaactagagcaagccacttacaagaatcgccaacgtctttac
ctttcggaacagactgatggcagtgttccaaatacccttgtcatagcaaactgtgaggta
gttaaacctagggttgcagcagcagagcacatatcacagttcaatgaggaagcgcgttct
ccatttgtaaagaagttcaaaactattatacatcctggcgaggtgaacagaatcagggaa
ctcccacagaatagtaagattgtggccacacacactgatagtcctgatgtccttatttgg
gacgttgaggctcaaccaaatcgtcatgctgttttgggagctacaaattctcgtccagac
ctgatattgactgggcatcaagataatgctgaatttgctcttgctatgtgtcctactgaa
ccctttgtgctttctggaggcaaggacaaatctgtagttttgtggagtattcatgatcat
atctcgactttagcagcagacacaggggctacgaagtctccagggtctggtggcagcagt
gctaagcatgcctctaaggctggtgggactaatgataaacctgcagacagcccttctatt
ggtccacggggtgtctaccaagggcacgaggataccgtagaagatgtgcagttctgccca
tcaagtgcacaggagttctgtagcgtaggcgatgattcttgccttatattatgggatgca
agagtgggatcctctccagttgtcaaggttgagaaagctcatgatgctgatcttcattgt
gttgattggaatcctcatgatgtaaatttcattctgacagggtctgctgatgctactgtt
cgcatgtttgatcgccgtaatctcacctctgggggtgttggatcacctgttcataaattt
gagggtcacaatgcagctgtcctttgtgtacagtggtctcctgacaagtcatccgtcttt
ggaagttctgctgaggatggcattttgaacatttgggatcatgagaaggttggtaatgtt
ggatctaaaatgcaaaatgttcctccaggcttattcttccgacatgctgggcatagggac
aaggttgtggacttccattggaatgcatctgatccgtggacaattgtcagtgtgtctgat
gattgtgaaagtactggaggaggtggtacactgcagatatggcggatgattgatttgata
tacaggcccgaggaagaagttctagctgaattggattcattcaagtcccacattttaaca
tgttcctcttga
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integrated database retrieval system
