Quercus suber (cork oak): 111988284
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Entry
111988284 CDS
T05868
Name
(RefSeq) nuclear poly(A) polymerase 4 isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111988284
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsu03019
]
111988284
Enzymes [BR:
qsu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
111988284
Messenger RNA biogenesis [BR:
qsu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
111988284
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
YutD-like
Motif
Other DBs
NCBI-GeneID:
111988284
NCBI-ProteinID:
XP_023875839
LinkDB
All DBs
Position
Unknown
AA seq
775 aa
AA seq
DB search
MVSSEGLSASPAPPAATATVAVAKKYGVTEPISMAGPTRADRQRSRDLEKFLVDAGLYES
KQEAEKREEVLDRIRQIVKDWVKQLTRLRGYTDQMVEDANAVIFTFGSYRLGVHGPGVDI
DTLCVGPSYVNREEDFFFILHNILAEMEEVTELQPIPEAHVPVMKFKFNGLSIDLLYASI
SLLVVPEDLDISDVSVLYNVDEPTVRSFNGCRVADQILKLVPNVEHFCTTLRCLKFWAKR
RGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCAIEEE
ELGFSVWDPRKNPRDRTHHMPIITPAYPCMNSSYNVSTSTLRVMMEQFQHGKEICEEIEL
NKAQWSDLFRPYFFFESYKNYLQVDIVAVDADDLLAWKGWVESRLRQLTLMIERDTFGKL
QCHPYPHEYVDTSKQCAHCAFFMGLQRKQGEMVQEGQQFDIRGTVDEFRQSVNMYSYWKP
GMEIYVSHVRRRQIPSYVFPDGYKRTRPSRPTAQQQADKSSHEYGEVGGTGSSERCLKRK
NSSDAVDVKQGMPVKRLSISPQRRDSISPDIISNKLSSVSSDHLASHSVGNNATAERNRT
WQVDTGKVEDLASNCRITGTGSVEQDRSLMEGAKRSNLELVEAQKRMLCPEAETAGCASN
SSIITTTPASEVSSCEDAGFGSVVGSSEGNTGSVEGSIEGSNNIGSSVADSCEAHSISPL
ENGCIYGNGVLQDGYQEELEPNAAVGMVINSRGEANLEAVEKPVQAEFNVNSVKD
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atggtgagttcagaagggttgagtgcctcgccggctcctccggcggcgactgcgactgtg
gcggtggcgaagaaatacggcgtcacggagccgatatcaatggcggggcccaccagagcc
gatagacagagaagcagagacttagagaagttcttggtggatgcggggctttatgagagt
aaacaagaagctgagaagagagaggaggtgcttgatcgtattcgtcagattgtaaaagat
tgggtaaagcaacttactcggttgagaggatacacggaccaaatggtggaggatgcaaat
gctgtgatttttacttttggttcatatcgacttggggtacatggtcctggggttgacata
gacactttatgtgttgggccatcatatgtgaatagggaggaagacttcttctttatactg
cacaatatcctggcagaaatggaagaagttacagaactacaaccaattccagaagctcat
gtcccagtaatgaaattcaagtttaatggactttccatcgaccttctttatgcaagtatt
tctctcttggttgtgccagaagacttggacatctctgatgtgtctgtattgtacaatgtc
gatgagcccactgttcgaagttttaatggctgcagggttgcagatcaaattcttaagctt
gttccaaatgttgagcatttttgcacgacactccgatgcttgaagttttgggccaaaagg
cgtggtgtttattccaatgtgactggatttcttgggggtgtgaactgggcacttcttgta
gctcgtgtgtgccagctttatcctaatgcagttcctagtatgcttgtctctcgatttttt
agggtttatacacagtggcgttggccaaaccctgtgatgttatgtgcaattgaagaggaa
gaacttggattttctgtatgggatcctcgtaagaatcctcgagaccggactcatcacatg
cctatcataactcctgcttacccatgcatgaattctagctacaatgtttcaacaagcacc
ctcagggttatgatggagcagttccaacatggtaaagagatttgtgaggagatagaactc
aataaagctcagtggagtgatctatttcggccatacttcttctttgaaagctacaagaac
tatctgcaggttgacatagttgcagttgatgctgacgacttgcttgcttggaaaggctgg
gttgaatctaggctgaggcaattgactctgatgattgagcgggacacatttgggaagttg
caatgccatccttatcctcacgagtatgtggatacatcaaagcagtgtgcccattgtgct
ttttttatgggtttgcaaaggaaacagggggagatggtccaagaaggtcagcagtttgat
atccgtgggactgttgatgaattcaggcaatctgtaaacatgtactcatattggaaacca
gggatggaaatttatgtttctcatgttcgtagaaggcaaattccttcatatgtgtttcca
gatggttataaacgaactcgaccctcaaggccgacagcccagcagcaggctgataaatca
tctcatgaatatggtgaagttggcgggactggctccagtgagagatgccttaagaggaaa
aacagttctgatgcagtggatgtgaaacaaggcatgcctgtaaaacggctatctattagc
cctcagagacgggattcgatttctcctgacattatcagtaataagttgagcagtgtgtct
tcagatcatctggcatctcattcagtgggaaataatgcaactgctgaaaggaacagaact
tggcaggttgacactggtaaagtggaagatttggcatcaaattgcaggattactgggact
gggtctgtcgagcaagatcggagcttgatggagggtgctaaaaggtccaatttggagcta
gttgaagctcaaaaaaggatgctatgcccagaagctgagacagcaggatgtgcctcaaat
tccagtattatcaccacaacccctgcaagtgaggtcagttcttgtgaagatgctggattt
ggatcagtggtaggtagcagtgaggggaatactgggagtgtggaaggaagcattgaaggg
agtaataacataggatcttctgtggctgattcgtgtgaggcccattcaatatctcctttg
gagaatggatgcatttatggcaacggagttctacaagacggatatcaggaagagttagag
ccaaatgctgcagttgggatggtaatcaattctaggggtgaagcaaacttggaagctgtg
gagaaaccagttcaggctgagtttaacgtcaacagcgtgaaagattag
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