Quercus suber (cork oak): 111988930
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Entry
111988930 CDS
T05868
Name
(RefSeq) MADS-box protein SOC1
KO
K09264
MADS-box transcription factor, plant
Organism
qsu
Quercus suber (cork oak)
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
qsu03000
]
111988930
Transcription factors [BR:
qsu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Homeotic genes
111988930
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SRF-TF
RT_RNaseH_2
RT_RNaseH
QueC
RVT_3
DUF3732
Motif
Other DBs
NCBI-GeneID:
111988930
NCBI-ProteinID:
XP_023876505
LinkDB
All DBs
Position
Unknown
AA seq
243 aa
AA seq
DB search
MGRGKIEIKGIENTTNRQVTFCKRRNGLLKKAYELSILCEAEVALIIFSSRGRLYEYANN
SPSKPREELYLYLAVSQAAVNAALVREEDRLQRPVYFTSRAFRGAEERCPQMEKLAFTLM
TAARKLKPYFQVNGSYECKNERMKKYLEEVKGRIGSLQVKFIQILREENECADQLAKAAS
AEHMLVPNQVLSFVQVSSLIDDGATMQEIGSKSNWTMSLVSYLRNGMLLNKKDATRKLKV
QAS
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggggagaggaaagattgagatcaaggggattgagaacactacaaaccgtcaagtcacc
ttctgcaagaggagaaatggcctcttaaagaaagcctatgaactgtctatcctatgtgaa
gctgaagtggctcttatcatcttctccagtcgtgggcggctttatgagtatgcaaacaat
agcccatccaagccaagggaagagctctatttgtacttagccgtctcacaagccgctgtc
aatgcagctttggtaagagaagaggataggttgcagagacctgtttattttacaagccga
gcgtttcgaggagcagaagaaaggtgccctcaaatggaaaagctggctttcacattgatg
actgcggcacgaaaactcaagccgtattttcaggttaatggcagctacgagtgcaagaat
gaaaggatgaagaagtacctcgaggaggtgaagggtcgaattggcagcctccaagtcaaa
tttatccaaatcttaagggaggagaatgagtgtgccgatcaactggctaaggctgcctca
gcggaacacatgctcgtccccaatcaggtattatctttcgttcaagtctcatcgcttata
gatgatggtgcaactatgcaggagataggttctaaaagcaactggaccatgtcattagtc
tcctacctaaggaatggcatgctgctaaataagaaagatgccacaaggaaattgaaggtc
caagcatcctga
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