Quercus suber (cork oak): 111989695
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Entry
111989695 CDS
T05868
Name
(RefSeq) uncharacterized protein LOC111989695 isoform X1
KO
K07456
DNA mismatch repair protein MutS2
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
111989695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
qsu03400
]
111989695
DNA repair and recombination proteins [BR:
qsu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
111989695
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MSSS
Smr
DNA_pol3_gamma3
SR_plectin_7
Motif
Other DBs
NCBI-GeneID:
111989695
NCBI-ProteinID:
XP_023877261
LinkDB
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Position
Unknown
AA seq
940 aa
AA seq
DB search
MGVELLPRRLDPNSIPTHRVNSFPMQLTNLLFASVALKAPPVLFPKVKALNSNSPESLTL
SQTLQSETLETLEWPSLCKQLSSFTSTTMGFSAAQKAKIPLGQTPEESHMLLDQTAAAAA
ASAMMDSPPLDFSGIEDVSGILNSAVSRELLSISELCAIRRTLRAAKLLFENLKQLVNTG
DCSETERYLPLLEILKHCNFQVELEHKIGFCIDCNLLMILDRASEDLEIIRLERKRNSES
LDSLLKGVSSQIFQAGAIDRPLITKRRSRMCVSIRASHRHLLPDGVILNVSGSGATYFME
PKEAIELNNMEVKLSNSEKAEEIAILSLLTSEIAESEIEIRYLLDRILEVDLAFARAAYA
QWMNGVSPIITSQGCEAINFSEEEDYALSVDIDGIQHPLLLESSLRSSSDVITSNSGNSV
HLGDGNGTMTSLSMLRGASDYPVPIDIKIKCGTRVVVISGPNTGGKTASMKTLGVASLMS
KAGMFLPAKNRPRIPWFDLVLADIGDHQSLEQSLSTFSGHITRICNILEVASRESLVLID
EIGSGTDPSEGVALSTSILQYLKDCVNLAVVTTHYADLSLLKEKDSQFENAAMEFSLETL
QPTYQVLWGSTGNSNALSIAKSIGFDLNIIERAQQWVEQLKPENQQERKGLLYQSLVEER
NRLEAQARRAGSLHAEILDLYHEIQNEAEDLGGRETALRAKETQQVQQELKTAKSQLDVV
IQEFENGLRIASADQFNSLIKKSESEIASIVEAHCPRDAYSVNDTDTKSYTPQIGEQVQV
TGLGRKLATVVEAPEDDETVLVQHGQIKVRVKKSNIRSIASSERNTETRYAPRLKRQGQQ
SKELQALPEPKKGEEVSYGPLVQTSKNTVDLRGKRVEEASYHLEMAISASGPYSVLFVIH
GMGTGAVKERALEILNNHPRIVKCEQESPMNYGCTVAYVK
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgggagtagaacttctccctcgccgactcgacccaaactcaatcccaactcacagagtc
aactcgttccccatgcaactcaccaatctcctattcgcctccgtcgccctcaaagcccct
ccagttctcttccccaaagtgaaagcgctcaattccaactcgcccgagtcactcactctc
tcacagaccctccaatccgaaaccctcgaaaccctagaatggccctcactctgcaaacaa
ctctcatcgttcacgtccaccaccatgggattctcggccgcgcagaaagccaagatcccc
ttgggccaaacaccggaggagagccacatgcttctcgatcagacggcggcggcggcggca
gcgtcggcgatgatggattctccgccattggatttctcggggatcgaggacgtctcgggg
attttgaactcggctgtttcgcgcgagttgctctcgatttcggagctctgcgcgattcgg
cgaacgctccgagccgcgaagctcttgttcgagaacttgaaacagttggttaataccgga
gattgctctgaaactgaaaggtacttgcctctgcttgaaatacttaagcactgcaatttc
caagtggagttagagcataaaataggattttgcattgattgcaatttgttaatgatcctt
gatagagctagcgaagatttggagatcattaggttagaaaggaagaggaactcagaaagt
ttggattctttgttgaagggagtgtcatctcagatttttcaggctggggcaattgacaga
cctctcataaccaagcgtcggtctagaatgtgtgttagtattagggcttcccaccgacat
ctacttccagatggtgtaatattaaatgttagtggttctggtgcgacatactttatggaa
cccaaagaagctatagagttgaacaacatggaagtgaagctttcaaactctgagaaagct
gaggagatagcaattttgagcttacttacatctgaaatagcggaatcagaaatagagata
aggtatttgttggatagaattttagaagttgatcttgcttttgcaagggctgcctatgct
cagtggatgaatggggtctctccaattatcacttcacagggttgtgaggcaataaatttt
agtgaagaagaagattatgctctgtcagtagatattgatggtatacaacatcctctgctc
cttgagtcctctctgagaagttcttcagatgtcatcacatccaactctggcaattcagtt
cacttgggtgatggaaatggcacaatgacttctttaagtatgttaagaggtgcatctgat
tatcctgtgccaatagacattaaaattaaatgtggaaccagggtggttgtgatatcaggg
ccaaatacaggagggaaaactgcttccatgaaaaccttaggtgtggcatctcttatgtca
aaggctggcatgtttttacctgctaagaaccgcccacgaattccgtggttcgatcttgtt
ctagctgatattggagatcaccagtctttggaacaaagtctctcaacttttagtggtcac
ataacacggatctgtaacatcttagaagtggcctcaagagaatcacttgtcctcattgat
gaaattggtagtggaacagatccttcagaaggtgtggccctttccaccagcatcttgcag
tatctcaaagactgtgttaacttggccgttgtgaccactcattatgcagatttgagtctc
ctgaaagaaaaggatagtcagttcgagaatgcagccatggaattttcactagaaacatta
caacctacttatcaggtcctctggggaagcactgggaattcgaatgccttgagtattgct
aaatcaattggttttgatctaaatataattgaacgtgcgcaacaatgggtggaacaatta
aagcctgaaaatcagcaagagcggaaaggtttgttatatcaatcactagtagaggaaaga
aacagattagaagctcaggccagaagagctggatctcttcatgcagaaattttggatcta
tatcatgagatccaaaatgaagcagaggatcttggtgggcgtgagacagctcttagggca
aaggaaacccaacaggtccagcaagaattaaagactgcaaaatctcagctggatgttgtg
atacaggagtttgaaaatggactcagaattgccagtgctgatcagtttaattcactgatc
aagaaatcagaatcagaaatcgcctctatagttgaagctcactgtcctcgtgatgcttat
tctgtcaatgatacagataccaaatcttacacacctcaaattggagagcaagtccaggtg
acgggattgggacgtaagttagctactgtggttgaagcacctgaagatgatgaaactgtt
ctagtacaacatggtcaaataaaggtccgtgtaaagaaaagcaacatcagatctattgca
agtagcgaaaggaatactgaaactagatatgccccacgtttgaaaaggcagggtcagcag
agcaaagagctccaggctcttccagagccaaaaaagggcgaggaggtttcatatggccca
ttggtgcagacatcaaagaacacagtggatttacgtggtaagcgagtggaagaagcttcg
taccaccttgaaatggccatctctgcaagtggaccatattcggttctgtttgtcatacat
gggatgggcactggggctgttaaggagcgtgcacttgagatattaaacaaccatccacgt
atagtcaagtgtgaacaagaaagtccaatgaattatggatgtacagttgcttatgttaag
tga
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