Quercus suber (cork oak): 111990287
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Entry
111990287 CDS
T05868
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111990287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsu03019
]
111990287
03009 Ribosome biogenesis [BR:
qsu03009
]
111990287
04131 Membrane trafficking [BR:
qsu04131
]
111990287
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
qsu04147
]
111990287
Messenger RNA biogenesis [BR:
qsu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
111990287
Ribosome biogenesis [BR:
qsu03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
111990287
Membrane trafficking [BR:
qsu04131
]
SNARE
SNARE associated proteins
Others
111990287
Autophagy
Aggrephagy
Other aggrephagy associated proteins
111990287
Exosome [BR:
qsu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111990287
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_33
AAA_2
AAA_5
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
nSTAND3
AAA_28
Mg_chelatase
AAA_17
AAA_18
Parvo_NS1
ATPase_2
IstB_IS21
ABC_tran
Viral_helicase1
NACHT
AAA_7
Vps4_C
NB-ARC
TsaE
AAA_24
AAA_lid_PRS2_C
Zeta_toxin
DUF815
Zot
Motif
Other DBs
NCBI-GeneID:
111990287
NCBI-ProteinID:
XP_023877844
LinkDB
All DBs
Position
Unknown
AA seq
806 aa
AA seq
DB search
MASQPESSDSKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVALHPDTMEKLQLFRGD
TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH
ILPVDDTIEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCV
VAPDTEIFCEGEPVRREDEDRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPA
LRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLSEDVDLERIAKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDETIDAEILNSMAVSNEHFQTALGTSNPSALRETVVEVPNCSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQI
FKACLRKSPISKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRRDN
PEAMEEDVEDEVAEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFAD
NTTSGATTSDPFATAAAGADEDDLYN
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcgagccaacccgaatcctcggactctaagggaacgaagagggactttagcacagcg
attcttgagcgcaagaaggccccgaatcggcttgttgtggatgaggcaatcaacgatgac
aactctgtcgttgcgcttcatcccgataccatggagaagctccagctcttccggggagac
acgatcttgatcaaggggaagaaaaggaaggatactatctgcattgcccttgctgatgac
acttgtgatgagccaaagataaggatgaacaaggttgtaagaagcaacctcagggtgagg
cttggagatgttgtttctgtgcaccagtgtgcagatgtcaaatatggaaagcgtgtccac
attcttcctgtggatgatactattgaaggggtcactggcaatctctttgatgcatacttg
aaaccttatttcctggaggcataccgcccagtgaggaagggtgacctgttccttgtgaga
ggggggatgagaagtgtagagtttaaggttattgagactgaccctccagagtactgtgtg
gttgctccagacactgagatcttctgtgagggagaacctgtgagaagggaggatgaggat
agattagatgaagttggttatgatgatgttggtggtgttagaaagcagatggcacagatt
cgtgaattagtggagctgcccctgaggcatccacagctatttaaatcgattggtgtgaag
ccaccaaaaggaattctattgtatggaccccctggatctgggaaaactctaattgcccgg
gctgttgccaatgaaactggtgccttctttttctgtatcaatggacctgaaatcatgtca
aaattggctggggaaagtgagagcaacctcaggaaagcatttgaggaagcagagaagaat
gcaccatccatcatctttattgatgagatcgattcaattgctcccaagagagagaagaca
catggagaagttgagaggagaattgtttcccagctcttgacgcttatggatggactgaaa
tctcgtgctcatgttattgtcatgggggctacaaatcgtcccaacagcattgaccctgcc
ttgagaaggtttggaagatttgacagggaaatagatattggagttccagatgaaattggg
cgtcttgaagttctccgtattcacacaaagaatatgaagctttctgaagatgttgaccta
gaaagaattgctaaggacacgcatggttatgttggtgctgatctagcagctctgtgtact
gaggctgctcttcaatgcatcagagagaagatggatgtgatcgatttggaagatgagaca
atagatgcagagatactaaattcaatggcagtttcaaatgagcacttccagactgctctt
ggaacaagcaacccatctgctctccgtgaaactgttgttgaagtgcccaattgcagttgg
gaagatattggaggtcttgagaatgttaagagggaacttcaagagactgttcaataccca
gtggagcatcctgagaaattcgagaagtttggaatgtcaccatcaaagggtgttcttttc
tatggccctcctggatgtgggaaaaccctcctggccaaagctattgctaatgaatgtcag
gcaaactttatcagtgtcaagggtcctgagttgcttacgatgtggtttggagagagtgaa
gccaatgtaagggaaatattcgacaaggcacgccagtctgctccttgtgttctattcttt
gatgaacttgactcaattgctactcagagaggtagcagtgtaggagatgctggaggtgct
gctgatagggttctgaaccaactcttgactgaaatggatggcatgtctgcaaagaaaact
gttttcatcattggggccaccaacagaccagacatcatagaccctgcacttctgcgtcca
ggtcgtcttgatcaattgatctacatccctctccctgacgaggactcccgccatcagata
tttaaggcatgcttgaggaaatctcctatctccaaagacgttgatctcagagcccttgcc
aagtatactcaaggctttagcggtgctgacattactgagatatgccagcgtgcatgcaaa
tatgccataagagagaacattgagaaagatattgagagggaaagaaggagaagggataat
cctgaggcaatggaggaggatgttgaggatgaagtagcagagatcaaggcagcccatttt
gaggaatcaatgaagtatgctcggaggagtgttagcgatgctgacatccgcaaataccag
gcatttgctcaaacattgcagcagtcaagagggtttggatccgaatttaggtttgctgat
aatactacttctggagccaccacatctgaccctttcgcgacggctgctgccggggctgat
gaagatgacctatacaattag
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