KEGG   Quercus suber (cork oak): 111990950
Entry
111990950         CDS       T05868                                 
Name
(RefSeq) uncharacterized protein LOC111990950
  KO
K15361  WD repeat-containing protein 48
Organism
qsu  Quercus suber (cork oak)
Pathway
qsu03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:qsu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    111990950
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:qsu03400]
    111990950
DNA repair and recombination proteins [BR:qsu03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     111990950
SSDB
Motif
Pfam: WD40 WD40_Prp19 DUF3337 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 NBCH_WD40 Beta-prop_TEP1_C Beta-prop_IFT122_1st WD40_MABP1-WDR62_2nd Beta-prop_SCAP Beta-prop_SPT8 Beta-prop_DCAF12 Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_DCAF4 WD40_MABP1-WDR62_1st WD40_RFWD3 RAWUL ANAPC4_WD40
Other DBs
NCBI-GeneID: 111990950
NCBI-ProteinID: XP_065631377
LinkDB
Position
Unknown
AA seq 777 aa
MHRVGSAGNTNNSSRPRKEKRLTYVLNDADDTSLILLCFAMFLYLQHCAGVNCLALLKSS
GTDGSDYLFTGSRDGTLKRWALTDDAATCSTTFESHVDWVNDAVLVGDNTLVSCSSDTTL
KTWNSLSDGTCTRTLRQHSDYVTCLAAAEKNSNIVASGGLGGEVFIWDLEAALAPLSKSG
DAMEDDCSNGINGSGNSLPISSLRTISSSNCISVHTNQSHGYVPIAAKGHKESVYALAMN
DSGTLLVSGGTEKVVRVWDPRSGSKTMKLRGHTDNIRALILDSTGRLCLSGSSDSMIRLW
DLGQQRCVHSYAVHTDSVWALASTPAFSHVYSGGRDLSLYLTDLATRESFLLCTGEHPIL
QMALHDDSIWAATSDSSVHRWPAEGRNPQKVFQRGGSFLAGNLSFSRARVSLEGSALVPV
FKEPTLTIPGTPGIVQHEILNNRRHVLTKDTAGSVKLWEITKGIVVEDYGKVSFEEKKEE
LFETVSIPAWFTVDTRLGSLSIHLDTPQCFSAEMYSADLNIAGKPEDDKVNLARETLKGL
LAHWLAKRKQRFGSQASANGDLLSGKDVSHRSLTHSRIEADINAENDSMVYPPFEFSTVY
PPSIITEGSHGGPWRKKITDLEGTEDEKDFPFWCLDCVLNNRLPPRENTKCSFYLHPCEG
STVQILTQGKLSAPRILRIHKVINYVIEKMVLDKPLDSVNPDGTFAPGLAGGQLQHSLIG
DGTFRSGLKPWQKLKPSIEILCNNQVLAPDMSLATVRAYIWKKADDLVLNYRLVQGR
NT seq 2334 nt   +upstreamnt  +downstreamnt
atgcaccgtgtaggtagtgcagggaacacaaacaattcttctcgccctcgtaaggagaag
aggttaacatatgtgttgaatgatgccgatgacacaagtctcatattactgtgttttgca
atgtttctctatctgcagcattgcgcaggtgtaaattgtttggctctattgaagtcatca
ggaactgatggcagtgattacctcttcactgggagccgtgatggcacacttaaaagatgg
gctttaacggatgatgcagctacctgttctactacttttgagtctcatgtggattgggtt
aatgatgctgtccttgttggtgataatactcttgtttcatgttcttcagatacaaccctt
aagacatggaacagtttgtctgatggaacatgtacaaggactctccgtcaacactccgac
tatgttacttgtcttgctgcagcagaaaaaaatagcaatattgttgcctctggtggcctt
ggaggggaggttttcatatgggatcttgaagctgcacttgctccgctatcaaagtcaggt
gatgcaatggaagatgattgttcaaatggtatcaatggttcaggaaattcactaccaatt
tcaagtttacgtaccataagctcaagcaactgcatttctgtgcacaccaatcagtcccat
ggatatgttccaattgctgccaaaggccataaggagtcagtttatgcattggcaatgaat
gatagtggaactcttcttgtctctggtggaactgaaaaggttgttcgagtttgggaccca
agatccggttcaaagactatgaaactacgagggcatacagataacattagggctttgatt
ctggattctactggcagactgtgcttatctggctcttctgactctatgatcagactctgg
gatcttggtcagcaacgatgtgtgcattcctacgctgtgcatactgattctgtttgggca
cttgctagcactccggcatttagtcatgtttatagcggtgggagagacctttctttatac
ttgacagacttggcaacaagggagagtttcttgctttgcacaggagaacaccctattttg
caaatggctttgcatgatgatagtatatgggctgctaccagtgattcttctgttcataga
tggcctgctgagggacgtaaccctcagaaggtctttcaaagaggcggttcattcttagct
ggaaacttgtcattttcgagggcaagggtctccttagaaggatctgcccttgttcctgtt
ttcaaagagccaacactaaccattcctggaactcctggaatagtgcagcatgaaattttg
aataatagaaggcatgtgttgactaaggatactgccggttccgtgaagctgtgggagatc
accaagggcattgtagttgaagattatggaaaggtgtcatttgaggagaaaaaggaagaa
ctatttgaaacggtaagcattcctgcatggttcactgtggataccaggcttggaagttta
tctatccatttggacaccccacaatgcttttctgctgagatgtattcagcagaccttaac
attgcagggaaacctgaggatgataaggttaatctagctcgagaaacccttaaaggactc
ttggctcattggttggctaaaagaaagcaaagatttggatcccaggcttcagcaaatggg
gatttgttatctgggaaggatgttagccatagaagtcttacccattcaagaattgaggct
gatattaatgctgagaatgactcaatggtgtatcctccatttgaattttcaactgtttac
cctccatccattattaccgagggctctcatggaggtccatggagaaagaaaattactgat
ttagagggaactgaagatgagaaggactttcctttctggtgtctagattgtgtgttgaat
aatcggctccctcccagagaaaataccaagtgcagcttttatttacatccatgtgagggt
tcaactgtccagatcctcacacaagggaaactaagtgcaccccgtatattgaggattcat
aaggtcattaattatgtcatagaaaagatggtccttgacaaacccttggatagtgtaaat
cccgatggaacgtttgccccaggactggctggagggcagttacagcattccttgattgga
gatggaacttttcggtccggattgaagccttggcaaaagctaaaaccctccatagagata
ttgtgcaacaatcaggtcttggccccagacatgagcttagccacagtgcgggcttatata
tggaagaaggctgatgaccttgttctcaattatagattggttcagggcaggtga

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