KEGG   Quercus suber (cork oak): 111991635
Entry
111991635         CDS       T05868                                 
Name
(RefSeq) DNA-directed RNA polymerase V subunit 5A-like
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
qsu  Quercus suber (cork oak)
Pathway
qsu03020  RNA polymerase
qsu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:qsu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    111991635
  09124 Replication and repair
   03420 Nucleotide excision repair
    111991635
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:qsu03021]
    111991635
   03400 DNA repair and recombination proteins [BR:qsu03400]
    111991635
Transcription machinery [BR:qsu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     111991635
  RNA polymerase III system
   RNA polymerase III
     111991635
  RNA polymerase I system
   RNA polymerase I
     111991635
DNA repair and recombination proteins [BR:qsu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      111991635
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N Phage_cap_P2 DUF2405
Other DBs
NCBI-GeneID: 111991635
NCBI-ProteinID: XP_023879194
LinkDB
Position
Unknown
AA seq 233 aa
MEGAGVEAEGQGEMNGEQEILGPCMSSYVDQESTESHRYYLARRTVLEMIKDRGYSVPTS
EIELSLQDFRAINGQTPDIERLRLSATHRTDPLKRILVIFCGPSMVKVNSIRLITSQIAN
KETLSGLILIVQNHITNQALKAVDILPFKVEIFQITDMLVNITKHVLKPKHRVLTDQEKQ
RLLKKYNIDEKQLPRMLQKDAIARYFALEKGQVVKVTYGGEITQSHVTYRCVW
NT seq 702 nt   +upstreamnt  +downstreamnt
atggagggtgctggtgttgaagctgaggggcagggtgaaatgaatggggagcaggagatt
ctaggaccttgtatgagcagctatgtggaccaagaaagcacagagagtcacagatactac
ctagctcgcagaactgtgctggaaatgatcaaggaccgaggctattctgtacccacttca
gagatcgagctctctctccaagacttcagagccattaatggccaaactcctgacattgag
cgcctccgcctctccgccactcatcgcacagaccctctcaaaagaattttggtcattttt
tgtggcccaagtatggtaaaagttaattcgatccgtctcattacaagtcagattgccaac
aaggagactttaagtgggttgatattaatagtgcaaaaccatataacaaaccaagcttta
aaagctgtggatattcttccatttaaagttgaaatattccagatcactgacatgctggtg
aacattacaaagcatgtgttaaagccaaagcatcgcgttttgactgaccaagagaaacaa
aggcttttaaaaaagtacaacatagatgaaaagcagcttcctcgaatgttgcaaaaagat
gcaattgcaagatactttgcacttgagaaagggcaggtggtgaaggttacctatggtggt
gaaatcacccagtcgcatgttacttaccggtgtgtctggtga

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