Quercus suber (cork oak): 111992287
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Entry
111992287 CDS
T05868
Name
(RefSeq) chromatin-remodeling ATPase INO80 isoform X1
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111992287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
qsu03036
]
111992287
Chromosome and associated proteins [BR:
qsu03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
111992287
INO80 complex (yeast)
111992287
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
111992287
NCBI-ProteinID:
XP_023879926
LinkDB
All DBs
Position
Unknown
AA seq
1539 aa
AA seq
DB search
MEHRRQSKDSHSYSNLFNLESLVNFQLPQQDDDFDYYGNSSQDESRGSQGGVNVKHGNGV
MRERELGLLKKRRQGENSEDEEDSYYGTRITEERYRSMLGEHIQKYKRRFKDSSASPAST
RMGISVPRSNMGLKARKLGNEHRGALHEVESTSDWLNDINPQKQGNYHEADFSPLNGTER
TTYEPAFVDIGDGITYKIPPTYDKVAPSLSLPSFPDIQVEEFFLKGTLDLGSLASMMTNN
NKFGPRSQAGMGEPQPQYESLHARLKALSASKSPQKFNLKVSDMNSSIPEGAAGNIKRSI
LSEGGVLQVYYVKVLEKGDSYEIIERALPKKPKVKKDPAVIEREEMEKIGKVWANIVKKD
LPKHHRIFTAFHRKQLIDAKRFVESCQKEVKTKMGRSHKLMKGAAIRTRKLARDMLLYWK
RVDKEMAEVRKREEKEAAEALRREQELREAKRQQQRLNFLIQQTELYSHFMQNKSNAQPS
EVLPVGDENLNDEEVLPSSSDAVPDEEEDPEEAELKKEALRAAQDAVSKQKKLTSAFDNE
CLRLRQASDSETYLPEVAGASNIDLHNPTTMPVTSTVQTPQMFKGSLKEYQLKGLQWLVN
CYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPASVLNNWNDEINRFCP
DLKTLPYWGGLQDRTVLRKKIKPKDLYRREAGFHILITSYQLLVSDEKYFRRVKWQYMVL
DEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNE
WFSKGIENHAEHGGTLNEHQLNRLHSILKPFMLRRVKTDVISELTRKTEVTVHCKLSSRQ
QAFYQAIKNKISLAELFEGNRGHLNEKKILNLMNIVIQLRKVCNHPELFERNEGRTYLHF
GEIPNSLLPPPFGELEDVHYAGGHNPITYKIPKLVHEEITHSSETLCTAVGRGVCRESFH
KLFNIYSPENVYRSIFLREDNSDGLSFESRTFGFTRLMDLSPSEVTFLATSSFMERLLFS
VMRWDQHLLDGLIESLMETMDDDPECSYLEKGKMRAVARMLLMPSRSNTNLLRSKYATGP
GDAPFEALVVPHEDRFLSNSRPLHSAYTFIPRVRAPPVGAHCSDRNFAYKMSEELHDPWI
KRMFIGFARTSDCNGPRKPVGPPHHLIQEIDSELPVSQPALQLTYKILGSSPPTRSFDPA
KLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIT
DRRDMVRDFQHRNDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG
QTKDVTVYRLICKETVEEKILQRASQKNTVQQLVMTGGHVQGDLLAPEDVVSLLLDDAQL
EQKLREIPLQVKDRQKKKQSTKGIRVDAEGDASLEDLTNAGSQGTGPEPSPDPEKTKSSN
KKRKAASDKQAPSKQRNPQNVTSPMDYELDDPLQNSDPQAQKPKRPKRPTKSVNENLQPA
FTGTPIVVSEQTHYLPVNELGSGGFRAGQDISQHTNSFT
NT seq
4620 nt
NT seq
+upstream
nt +downstream
nt
atggaacacaggagacaatccaaggactcgcattcctactcgaatctcttcaatcttgag
tctttggtgaactttcaacttccacaacaggatgatgattttgattattatgggaatagt
agtcaggatgagagcagaggtagccaaggtggagtgaatgtgaaacacggtaacggggtt
atgcgtgaaagagaattgggtttgttgaagaaaaggaggcagggtgaaaatagtgaggac
gaggaggatagttattacgggacacgcattacggaggagagatatcgatcaatgcttgga
gaacacattcagaagtacaagaggagattcaaggattcctcagcaagtcctgcatcaacc
aggatgggaatctctgttccaaggagtaatatgggtttaaaagctaggaaactagggaac
gagcatcgaggagcattacatgaagttgaatcgacgtccgactggctcaatgatattaat
cctcaaaaacaagggaactatcatgaagcagatttttcaccgctaaatggcactgaaaga
acaacatatgaacctgcttttgtggatattggagatggtatcacgtataagattcctcca
acttatgataaggtggcaccatcactgagcttgccgagctttccagatattcaggtggag
gaatttttcttaaagggtacattggatctggggtccttggcatcaatgatgacaaataat
aataagtttgggcctagaagccaggcaggaatgggggagcctcagccccagtatgaatca
cttcatgcaagattgaaggccttgtcagcttctaaatcaccccaaaagttcaatctcaaa
gtatctgatatgaattcctccattccagagggggcagctggaaacataaagcgatctatt
ttgtctgagggtggcgttttgcaggtttactatgtgaaggttttggagaaaggagactca
tatgagatcattgaacgggctctgcccaagaagccaaaggtaaagaaagaccctgctgtg
attgaaagggaggaaatggagaagattgggaaagtgtgggcaaacatcgtaaagaaagac
ctaccaaagcatcacagaatttttacagcttttcaccgaaagcaactaattgatgccaag
aggttcgtagagagctgtcaaaaagaggtgaaaacgaagatgggaaggtcacataaactg
atgaagggtgctgcgattcgcactaggaaattagctcgagacatgctgctgtattggaag
cgagtagataaagagatggcagaagtaaggaaaagagaggagaaagaagctgctgaagct
ctgaggcgtgaacaagagctacgagaagcaaagagacagcagcaaaggctcaattttctt
atacaacaaacggaactctacagtcattttatgcaaaacaagtcaaatgcacagccctct
gaagttttgcctgtgggagatgaaaatctaaatgacgaagaagtacttccgagctcttca
gatgctgtacctgatgaggaagaagatcctgaggaggctgaattgaagaaggaagccttg
agagctgctcaagatgcagtttctaagcagaaaaagttaacaagtgcatttgataatgaa
tgtttgagactgcgacaggcttctgactctgagacttatttacctgaggttgcaggagct
agtaacatagatttacataacccaactacaatgcctgtaacatcaacagttcagactccg
cagatgtttaaaggttcccttaaagaatatcagctaaaaggccttcagtggctagttaat
tgttatgagcagggtttaaatggcatacttgctgatgagatgggccttgggaagaccatc
caggccatggcatttttggctcatttggcagaggagaaaaatatatggggcccttttttg
gttgttgccccagcttctgtattgaataactggaatgatgaaattaatcgtttctgccct
gacttgaaaactcttccatattggggtgggcttcaagatcgaaccgtacttaggaaaaag
atcaaacccaaggacctgtaccgcagggaagctggatttcacattctcattaccagctac
cagctgctagtgtctgatgagaagtactttcggcgtgtgaaatggcaatacatggtgtta
gatgaagcccaggcaatcaaaagttcgaacagtataagatggaagacactgcttagcttc
aattgtcggaaccgactgctgctgactggtacacctatccagaataatatggcagagttg
tgggcccttttgcattttattatgccaaccttatttgacagccatgaacaatttaatgag
tggttttcaaaaggaattgagaaccatgcagagcacgggggtactttgaacgagcaccag
cttaacagattgcattcaattctaaagccgtttatgctgcgaagagttaaaacagatgta
atttctgagctgaccaggaaaactgaggttacagtgcattgcaaattgagttctcgccag
caagctttttatcaggctattaagaacaagatatctcttgccgagttgtttgagggcaat
cgtgggcatcttaatgagaagaaaatactaaatttaatgaatattgtcattcagctgaga
aaggtgtgtaatcatccagagttgtttgaaaggaatgagggaagaacatacctccacttt
ggggagatcccaaattctcttctgccccctccctttggggagttggaggatgtgcactat
gcaggaggtcacaatcctataacatacaagataccgaaactagttcatgaagaaattacc
catagttctgaaactctttgcacagcagttgggcgtggtgtctgcagagaatcttttcac
aaactcttcaacatatactcacccgaaaatgtctatcgatctatattcctacgagaggat
aattcagatggattatcttttgaaagtagaacttttggttttacacgtttgatggatctg
tccccgtcagaggttacatttttggctactagctcttttatggagcgactactgttttct
gtaatgagatgggaccagcacttgttggatggactcatagaatcacttatggaaaccatg
gatgatgaccccgaatgcagttaccttgagaaagggaaaatgagagcagttgcgcggatg
ttactgatgccatcaagatctaatacaaacttactacgaagtaaatatgcaacggggcct
ggagatgctccatttgaggctttagttgtccctcatgaggacaggtttctatccaatagt
aggcctcttcattcagcatacacatttatcccgagagttagagctccaccagttggtgct
cactgctccgatagaaactttgcctacaaaatgtctgaagaactacatgacccctggata
aagaggatgtttattgggtttgcacgcacatctgactgtaatggacccagaaagccagtt
ggtcctcctcatcatttgattcaagagattgattctgaactaccagtctcacaacctgct
cttcagttgacatacaagattttgggatcttctccaccaacgagaagctttgacccggca
aagttgctcactgactctgggaagcttcaaacacttgatatattgttgaaacgtttgcgg
gcagaaaatcaccgtgttctcttgtttgcccaaatgacgaagatgctgaatattcttgag
gactacatgaactataggaaatatagatatcttagactcgatggatcctccaccataact
gatcgtcgagatatggtcagagatttccagcatcggaatgatatttttgtattcttgttg
agcacaagagctggtggactgggcattaacttgacagcggctgacactgtcatattttat
gaaagtgattggaatccaactttggatttacaggcaatggatagagctcatcggttgggt
caaacaaaagatgttactgtttaccgacttatttgtaaagagacagttgaagagaagatt
cttcaaagagcaagtcagaagaatactgtgcagcaacttgttatgacaggtggtcatgtt
cagggtgatctattggcccctgaggatgttgtatccttacttctggatgatgcccaactc
gagcagaaattgagagaaattccattgcaggttaaggatagacaaaagaaaaaacaatca
acaaagggtattcgggtagatgcagaaggtgatgcatctttggaagacctaacaaatgct
ggatctcagggtacaggacctgagccctctccagatccagagaaaacaaaatccagtaac
aaaaagagaaaggctgcttctgacaaacaagctccatcaaagcaaaggaatcctcaaaat
gtgacttcaccaatggactacgagttagatgacccccttcaaaattctgatccacaagca
cagaagcccaaaaggccaaagagaccaacgaagagtgtaaatgaaaatcttcaaccagca
tttaccggcacacccattgtagtttcagaacagacccattatctacctgtgaatgagtta
ggatctggtggtttcagagcagggcaagatatctcacagcataccaactcgttcacttga
DBGET
integrated database retrieval system
