Quercus suber (cork oak): 111995121
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Entry
111995121 CDS
T05868
Name
(RefSeq) probable RNA helicase SDE3
KO
K18422
helicase MOV-10 [EC:
5.6.2.5
]
Organism
qsu
Quercus suber (cork oak)
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsu03019
]
111995121
03036 Chromosome and associated proteins [BR:
qsu03036
]
111995121
Enzymes [BR:
qsu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
111995121
Messenger RNA biogenesis [BR:
qsu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
111995121
Chromosome and associated proteins [BR:
qsu03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
111995121
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MOV-10_beta-barrel
AAA_11
Motif
Other DBs
NCBI-GeneID:
111995121
NCBI-ProteinID:
XP_023882798
LinkDB
All DBs
Position
Unknown
AA seq
586 aa
AA seq
DB search
MGGLFSSPDQSSSQSPPTYSSYSSNPFPPTYSSRPSASSSNLSRSSPKPPSLSPSPSPSS
LKTPVHSSTSYASFPKTTEPPSASSSSSTSYKPPQSSPSGFPYSSKPPPSSSGSSPSYTK
QPPAFKPILHTAPNEVTNEEGKTTYAWEKGEPIYAIPEDIKGLVKRDIAPQVLKQPLSPS
TYKAYFAALLYAEDYYLEKWSNFLLEKVTLKLEEAALHKKSKKSKYSKGSGEEEDDKIFV
EFEIDSIPEKRPFLLSRDMVYARPSDKTVEPFQGFIYRVVKSKCVLVEFGEDFHSQHHPN
RKYDISFSFNRVCLKRAHQAVEAALDPSSHNFLFPECVPRKNILNPPALLNTYYKLDTNE
SNAVRRILSFQGSPPYLLAGPLIGTNAPRYVPEQKVSARTGVVVCEAVIEIYKTSQENRI
LICAPINRTCDVLMRSLREVIPESDMFRANAAFREIDGVPIDILRSCPVKDECFACPPLQ
KLRKFKIILSTFVSSFRLHNEGIAAGHFSHIFLVDASSTTEPEATIALANFANENTSVIV
TGAPGNHSNWIRSNIARNYGLGKSYFERLREVRPYQILNPMFITEL
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgggaggccttttcagcagtcctgatcagagttcttcccaatcgccacctacatattct
tcttacagttcaaatccatttccacctacatattcctctagaccatctgcatcttcctca
aacctatcccgatcttcaccaaaaccaccttccttgtctcctagtccatctccatcatcc
cttaaaactccagttcattcttctacatcatatgcatctttccccaagaccactgaaccc
ccatctgcttcttcttcttcttcaacttcctataaaccacctcaatcttcaccttcaggg
ttcccatattcatctaagccaccaccttcttcctctgggtcatctccgtcttacactaag
caaccaccagcttttaagccaattctgcatacagctcccaacgaggtaacaaatgaagaa
gggaagacgacttatgcgtgggaaaagggtgaacccatatatgctattcctgaggatatc
aaaggtctcgttaagagagacattgcacctcaagttctgaagcagcctttgtctccttca
acttataaggcttattttgctgctctgttatatgctgaggattactacttggagaaatgg
agtaatttcctattggagaaagtgacattgaagttggaggaagcagcacttcataaaaaa
tcaaagaaatcaaaatattctaaaggaagtggtgaggaggaggatgataaaatctttgta
gaatttgagattgattctattcctgagaagcggccattccttttatcaagggacatggtt
tatgcacgaccttcggataaaacggttgagccatttcagggttttatctatcgtgtggtg
aaaagcaagtgtgtattagttgagtttggagaagattttcattcacagcatcatccaaat
cgcaaatatgacatcagcttctcattcaacagagtctgtctaaaaagggctcatcaagca
gttgaagctgcattagatccttcatcccacaactttctttttcctgaatgcgtccctcgg
aagaacatccttaacccaccagctctgcttaatacctattataagcttgatacaaatgaa
tcgaatgcagttcgtcggattctaagctttcagggctcaccaccttatcttcttgcgggc
ccgctcattggcactaacgcgccaaggtatgtacctgaacaaaaagtgtcagcaagaaca
ggagtggttgtttgtgaggcagtaattgaaatatataaaacctctcaagagaacagaatt
cttatatgtgcacctataaaccgcacatgtgatgtgctaatgagaagtttgagggaggtg
attccagagtcagatatgtttcgagccaatgctgcatttcgagagatagatggagtaccc
attgacattctgcgctcatgtcctgtaaaagatgaatgttttgcatgtcctccactccaa
aaacttcggaagttcaagataattctgtcaacttttgtgagtagcttccggctacacaat
gaaggcatagctgctggacattttagtcatatttttctagtggatgcctcgtcaaccaca
gagccagaagcaacaatagctttggctaattttgctaatgagaatacatctgttattgtt
actggtgcacccggaaaccattcaaattggatccgctctaacatagcaaggaactatgga
ttggggaagtcatattttgaaagacttcgtgaagttaggccatatcaaatcctcaatcca
atgttcatcacagagctataa
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