Quercus suber (cork oak): 111995158
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Entry
111995158 CDS
T05868
Name
(RefSeq) serine/arginine-rich splicing factor SR30
KO
K12890
serine/arginine-rich splicing factor 1
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111995158
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
qsu03041
]
111995158
Spliceosome [BR:
qsu03041
]
Common components
Common spliceosomal components
SR proteins
111995158
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_YTH1
RRM_occluded
Nup35_RRM_2
RRM_3
Motif
Other DBs
NCBI-GeneID:
111995158
NCBI-ProteinID:
XP_023882832
LinkDB
All DBs
Position
Unknown
AA seq
294 aa
AA seq
DB search
MSSSSSRTIYVGNLPGDTRLREVEDLFCKYGPIVDIDLKLPPRPPGYAFIEYEDSRDAED
AIYYRDGYNFDGYRLRVELAHGGRGNSSSADHHGSYGGSGSSRAAPKHSDYRVLVTGLPP
SASWQDLKDHMRQAGDVLFSQVFRDRGGMTGIVDYAHYDDMKYAIKKLDDSEFRNAFSRS
YVRVREYDSRRSYSRSRSRDSRRSYSRSPYMSRSPSRSRSYSGRSGSISPKRKYSRRSPS
VSSSRSRTRSRSPVTSHRRRESRSPSRSIRSISRSRSASVRSDRSRSIDSRDRD
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgagtagcagttcgagccgtaccatctatgttggtaatctcccaggtgacactcgtttg
agagaagtagaagatctcttttgtaagtatgggcctattgttgacattgatctgaagctc
ccaccaagacccccaggctatgcttttattgagtatgaagattctcgtgatgctgaagat
gcaatttattaccgggatgggtacaactttgatggttatcgcttacgagttgaacttgca
catggtgggcgaggaaattcgtcatcagcagatcaccatggcagttatggtggtagtggc
agtagccgtgctgctcccaagcattctgactatcgtgttctggtcactggattacctcct
tctgcttcatggcaagacctaaaggatcacatgcggcaagctggtgacgtccttttctct
caagtattccgtgaccgtggtggcatgacaggaattgtggattatgcacactatgatgac
atgaagtatgctatcaaaaaacttgatgattctgaatttcggaatgctttttctcggtct
tatgtacgggtgagagagtatgattcaaggcggagttactctagaagtcgcagccgtgat
tcaagacggagctactctagaagtccttacatgtcgagaagccctagtcgcagccgtagc
tatagtggcaggagtgggagcatatctccaaagagaaaatattcacgtcgatctccatca
gtctctagttcaagatctcgaacaagatccagatctccagttacttctcatcgtcgtcgt
gaaagtcgcagtcccagcaggagcattagaagtatatcacgatcccgttcggcttctgtg
agatctgatcgaagccgatctattgactccagggatcgcgattga
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