Quercus suber (cork oak): 111996051
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Entry
111996051 CDS
T05868
Name
(RefSeq) cell division control protein 48 homolog C
KO
K14571
ribosome biogenesis ATPase
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
111996051
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
qsu03009
]
111996051
Ribosome biogenesis [BR:
qsu03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
111996051
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_16
AAA_5
AAA_22
AAA_14
TIP49
RNA_helicase
AAA_33
AAA_2
NPHP3_N
AAA_28
AAA_17
IstB_IS21
AAA_18
nSTAND3
Mg_chelatase
Rad17
Parvo_NS1
TsaE
Viral_helicase1
NB-ARC
AAA_3
NACHT
Bac_DnaA
AAA_19
Zeta_toxin
AAA_30
AAA_11
Motif
Other DBs
NCBI-GeneID:
111996051
NCBI-ProteinID:
XP_065634653
LinkDB
All DBs
Position
Unknown
AA seq
701 aa
AA seq
DB search
MKKRTRADEDEEKLELIEDSHIKSRTSADTTPQTKSSSSEDSSSDGTTSTSDDDDNVFHM
SEDDDVDTSKAENKIEQMGSDNGNGERVKVEVEAQAQAQAQAQAQKNGNGHGNGERGIMG
PRFKDFGGIDSVIEELKMEVIVPLYHRELPRCLGVQPMSGILLHGPPGCGKTKLAHAIAN
ETGFPFHMISSTGIISAISGAAEENIHQLFSRAYNTAPSILFIDEIDAIGSKRENLRDME
RRTVTQLITCMDVLQRLYQAHAKSNSESSNTKPGYVLVIGATNRPDALDPALRMPGRFDR
EIAIGVPDETGRLDILSVLTRNLKLEGSFNILNLARSTPGFVGADLSALANKAGNLAMKR
IIDERKSELSKYSSINEKHSEEWWRQPWLPEEMEKLAITMADFEEAVKMVQPSSRREGFS
TIPNVKWEDIGGLDFLRKEFDRYVIRRIKHPEDYEGLGLDLDTGFLLYGPPGCGKTLIAK
AVANEAGANFIHIKGPELLNKYVGESELAVRTLFGRARTCSPCILFFDEVDALTTNRGTE
GGWIVERLLNQLLIELDGAEQRRGVFVIGATNRPEMMDRAILRPGRFGKLLYVPLPSPDE
RGKILKALARKKPIDASVDFSSIGRMEACENFSGADLGALMNEAAMVALEDRLKSTENTS
DAASLTIKSTHFERAVGQISRSVSDKQKQYYQMLSENLKAA
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagcgaacaagagctgatgaagatgaagagaagttggagctaatagaagattca
catattaaaagtagaacgagtgcggacactactcctcaaacgaaatcatcatcgtctgag
gattcaagttccgatggaacaacctccacgtcagatgatgatgataatgtgtttcacatg
tcagaagatgatgatgttgatactagcaaggctgagaataagattgaacaaatgggtagt
gataatggtaatggggagagagtgaaagtggaagtggaagctcaagctcaagctcaagct
caagctcaagctcagaagaatggtaatggtcatggtaatggggagaggggaataatgggg
ccgaggtttaaggattttggagggatagatagtgtaattgaagagctaaaaatggaggtg
attgtgccattgtaccatagagagttaccgaggtgccttggagtccaacccatgtccggg
attttgttgcacgggccacccggttgtggcaagaccaaattggctcatgccattgccaat
gagaccgggtttccatttcatatgattagctcaactgggatcatctctgctatctctggt
gcagcggaggaaaatattcatcagcttttctctagagcatacaacactgcaccgtcaatt
ttatttattgatgaaattgatgcaattggttctaaaagagaaaatctaagagatatggag
cgacgaactgtaacacagttgataacttgcatggatgtacttcagagactataccaggca
catgctaagtcaaactcagaaagttctaatacgaaacctggctatgtgcttgtaattgga
gctaccaataggcctgatgcccttgaccctgcactaaggatgcctggacgatttgaccgt
gagattgctataggtgttccagatgaaactggaaggcttgatattctttctgtacttaca
cgcaatcttaaactggagggttctttcaatattctcaatctagccaggtctacgcctggt
tttgttggggctgatttgtctgccctggctaacaaggctggtaaccttgccatgaagaga
attattgatgaaagaaagtctgagctatctaaatattcttctataaatgagaagcattct
gaagagtggtggaggcaaccatggttgcctgaagagatggaaaagcttgccatcacaatg
gctgattttgaggaagctgttaaaatggttcaaccatcatcaagaagagaaggattctct
accattcctaatgtaaaatgggaagatatcggtgggcttgatttcttaagaaaagagttt
gaccgttacgtaattagacgtattaaacatccagaggattatgaggggcttggattggac
ttagatacaggatttttgctctatgggcctccaggttgtggtaaaacactgattgccaag
gctgtagctaatgaggcaggagccaatttcattcacatcaagggccctgaacttttgaat
aagtatgttggagaaagtgagctggcagttcggacattattcggtcgtgcaaggacgtgt
tcaccatgcatacttttctttgatgaggtggacgctttgacaacaaatcgtggtacagaa
gggggatggattgttgaacggctactgaaccagttgcttatagaattagatggtgcagag
cagcggcggggtgtttttgtcattggtgcaacaaacagacctgagatgatggaccgagcc
atcttacggcctggtaggtttggtaaacttctttatgttcctttgcccagtccggatgag
cgtggaaagatcttaaaagctcttgcaaggaagaagcctatagatgccagtgtggatttc
agttctattgggcgaatggaggcctgcgaaaattttagtggagctgatcttggtgcactg
atgaatgaagctgcaatggttgctcttgaagacagactgaaatcaactgagaacacctca
gatgcagcttctttgacaatcaaatcaacacattttgagagagcagtgggtcaaatctcg
cgttccgtgtcagacaagcaaaaacaatactaccaaatgttgtctgagaacttaaaggca
gcatga
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