Quercus suber (cork oak): 111996315
Help
Entry
111996315 CDS
T05868
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen2-1
KO
K15322
tRNA-splicing endonuclease subunit Sen2 [EC:
4.6.1.16
]
Organism
qsu
Quercus suber (cork oak)
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
qsu03016
]
111996315
Enzymes [BR:
qsu01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
111996315
Transfer RNA biogenesis [BR:
qsu03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
111996315
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
DNA_processg_A
Motif
Other DBs
NCBI-GeneID:
111996315
NCBI-ProteinID:
XP_023884042
LinkDB
All DBs
Position
Unknown
AA seq
299 aa
AA seq
DB search
MEPRWKGKGFKAKALAEPMSKIVSQLQSSLIQSDAHGLLTGCTVLIAVKPEQTDLLDRAC
FGKRIVTAEKDNEWFQLGLEEAFYLCFSLKCLKVVGDDKCPKNDVELWLCMISRKPNFPD
FYKAYSHLRIKNWVVKSGLNYGVDFVAYRHHPSLVHSEYAVLVLSEGEDEGNGRLRLWSD
LHCTTRVSGSVVKTLLVLRITNNGNDVASPSCLEKYTVVERAIRRWHPEQCREDNMIREN
RTKQQEALGKASLKTKFTQKHDVKLKPGLVGIERGLSLVSISLVFALISFIVSSWFWSN
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggagcccagatggaaagggaagggcttcaaagctaaagctcttgcagagcccatgtca
aagatagtatcccagctgcagtcttcgctaattcaatcagatgctcatggattgctcact
gggtgtactgtactcatagctgtaaaaccagagcaaactgatcttcttgaccgtgcgtgt
tttggtaaacgcattgttacagctgaaaaggataatgagtggtttcagctgggtctagaa
gaagccttttacctatgtttttcgttaaagtgtctcaaggttgtaggtgatgataagtgt
ccaaagaatgatgtagagctatggctgtgcatgatatcacgaaaaccgaatttccctgat
ttctacaaggcttattctcatcttcggataaagaattgggttgtcaagtcaggtttgaat
tatggagtggattttgttgcctaccggcaccacccgtctctggtccattctgaatatgct
gtgcttgtgttatcggaaggagaggacgagggaaatggccggttgaggttgtggtctgat
cttcattgcactactcgagttagtggaagtgttgtgaagacacttttggttcttaggatc
actaacaatggtaatgatgttgcctctccatcatgtttggaaaaatacactgttgtagag
cgagctatcagaagatggcatccagaacaatgccgtgaagataatatgatacgggaaaac
agaaccaagcaacaagaagcgcttggaaaagcaagtttaaagaccaaatttactcaaaaa
catgatgtgaaattgaagccgggcctagttggaattgaacgaggtcttagtctagttagt
attagtcttgtttttgccttgatttcctttatagtaagcagttggttttggtctaattaa
DBGET
integrated database retrieval system
