KEGG   Quercus suber (cork oak): 111996458
Entry
111996458         CDS       T05868                                 
Name
(RefSeq) THO complex subunit 4A
  KO
K12881  THO complex subunit 4
Organism
qsu  Quercus suber (cork oak)
Pathway
qsu03013  Nucleocytoplasmic transport
qsu03015  mRNA surveillance pathway
qsu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:qsu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111996458
  09122 Translation
   03013 Nucleocytoplasmic transport
    111996458
   03015 mRNA surveillance pathway
    111996458
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:qsu03019]
    111996458
   03041 Spliceosome [BR:qsu03041]
    111996458
Messenger RNA biogenesis [BR:qsu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     111996458
    TREX complex
     111996458
Spliceosome [BR:qsu03041]
 Complex C
  Other components
   EJC/TREX
    111996458
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    111996458
SSDB
Motif
Pfam: RRM_1 FoP_duplication
Other DBs
NCBI-GeneID: 111996458
NCBI-ProteinID: XP_023884208
LinkDB
Position
Unknown
AA seq 253 aa
MANKLDMSLDDMIKNSRRSGGYNGNSNSRGRGRSSGPGPGPGPDRRFPNRNFQRTAPYYA
PQGMQMMNPMLTQQVVLGVGGGVGVGGSNINNSEDGTKLYISNLEYGVTNDDIKVLFCEI
GDLKRYSIHYDRSGRSKGTAEVVFLRQADALAAIKRYNNVQLDGKPMKIELVGVNLVTPP
VVPPFPNSILGKPNFAFRRGRPAPGGWVRGGAGGIGGGPARGRARAKGPVEKLSAEDLDA
DLEKYRLEAMQIN
NT seq 762 nt   +upstreamnt  +downstreamnt
atggccaataagctggacatgtccctcgacgacatgatcaagaatagccgaagatccgga
gggtacaatggtaattctaattcccgtggccgaggccgctcctccggtcccggcccaggc
ccaggcccagaccgccgcttccccaaccgcaactttcaaagaaccgcaccatactacgct
ccacagggaatgcaaatgatgaatccgatgttgacacaacaagtggtgttgggtgtgggt
ggtggtgttggtgttggtggatctaacattaacaactcagaggacggtaccaagctatat
atatcaaacttagagtacggtgttactaatgacgacattaaggtacttttctgtgagatt
ggtgacctgaaaagatattcaatccattatgataggagtggaagatcaaagggaacggca
gaagttgtctttttacgccaggcagatgctctagcagctatcaagagatacaacaatgtt
cagcttgatgggaagccaatgaaaattgagcttgtaggagtgaatctggttactcctcct
gttgtgccaccttttccaaacagcatattaggaaaaccaaattttgccttcagaagagga
aggcctgctcctggaggttgggttcgtggtggtgctggtggcattggcggcggacctgca
aggggccgtgcacgagcaaaaggtcctgttgagaagttgtctgcagaagatcttgatgct
gacttggagaaataccgccttgaagctatgcaaataaactga

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