Quercus suber (cork oak): 111996458
Help
Entry
111996458 CDS
T05868
Name
(RefSeq) THO complex subunit 4A
KO
K12881
THO complex subunit 4
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu03013
Nucleocytoplasmic transport
qsu03015
mRNA surveillance pathway
qsu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111996458
09122 Translation
03013 Nucleocytoplasmic transport
111996458
03015 mRNA surveillance pathway
111996458
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsu03019
]
111996458
03041 Spliceosome [BR:
qsu03041
]
111996458
Messenger RNA biogenesis [BR:
qsu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
111996458
TREX complex
111996458
Spliceosome [BR:
qsu03041
]
Complex C
Other components
EJC/TREX
111996458
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
111996458
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
111996458
NCBI-ProteinID:
XP_023884208
LinkDB
All DBs
Position
Unknown
AA seq
253 aa
AA seq
DB search
MANKLDMSLDDMIKNSRRSGGYNGNSNSRGRGRSSGPGPGPGPDRRFPNRNFQRTAPYYA
PQGMQMMNPMLTQQVVLGVGGGVGVGGSNINNSEDGTKLYISNLEYGVTNDDIKVLFCEI
GDLKRYSIHYDRSGRSKGTAEVVFLRQADALAAIKRYNNVQLDGKPMKIELVGVNLVTPP
VVPPFPNSILGKPNFAFRRGRPAPGGWVRGGAGGIGGGPARGRARAKGPVEKLSAEDLDA
DLEKYRLEAMQIN
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atggccaataagctggacatgtccctcgacgacatgatcaagaatagccgaagatccgga
gggtacaatggtaattctaattcccgtggccgaggccgctcctccggtcccggcccaggc
ccaggcccagaccgccgcttccccaaccgcaactttcaaagaaccgcaccatactacgct
ccacagggaatgcaaatgatgaatccgatgttgacacaacaagtggtgttgggtgtgggt
ggtggtgttggtgttggtggatctaacattaacaactcagaggacggtaccaagctatat
atatcaaacttagagtacggtgttactaatgacgacattaaggtacttttctgtgagatt
ggtgacctgaaaagatattcaatccattatgataggagtggaagatcaaagggaacggca
gaagttgtctttttacgccaggcagatgctctagcagctatcaagagatacaacaatgtt
cagcttgatgggaagccaatgaaaattgagcttgtaggagtgaatctggttactcctcct
gttgtgccaccttttccaaacagcatattaggaaaaccaaattttgccttcagaagagga
aggcctgctcctggaggttgggttcgtggtggtgctggtggcattggcggcggacctgca
aggggccgtgcacgagcaaaaggtcctgttgagaagttgtctgcagaagatcttgatgct
gacttggagaaataccgccttgaagctatgcaaataaactga
DBGET
integrated database retrieval system