Quercus suber (cork oak): 111997686
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Entry
111997686 CDS
T05868
Name
(RefSeq) uncharacterized protein LOC111997686
KO
K12586
exosome complex component RRP43
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111997686
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsu03019
]
111997686
Messenger RNA biogenesis [BR:
qsu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
111997686
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
111997686
NCBI-ProteinID:
XP_065624886
LinkDB
All DBs
Position
Unknown
AA seq
194 aa
AA seq
DB search
MGLLDAPGDLSSEVDVDAFRHLFPLCFYERHLTESIRPDGRPLGRARDTTIAHGAVASAE
GSALAKIGSTTMLAAIKMEVMTPSMDSPDEGCIAIDFHMPPICSPIVRPGRPAEVAPVVS
KQLSDTILSSGMINLKELSLVSGKAAWMAYLEIYCLDADGALFDAALLSAVAAFSHXLCC
VDKAKNEGTTKDFR
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgggattgctagatgcaccaggagatttgtcatcagaagtggatgttgatgctttcaga
catctcttccctctttgtttttatgagcgtcatctcactgaatctataaggccggatggt
aggccacttggaagagctagagatacaactatagcccatggagctgttgcatctgctgag
ggttcagcattggcaaagattggttcaactacaatgttggctgctattaaaatggaagta
atgactccttccatggactcaccggatgaaggctgcatagctatcgatttccacatgcct
ccaatttgttctccaattgttaggcctggcaggccagctgaggtagcaccagttgtgtca
aaacaattgtctgacactattttaagttctggcatgatcaacttgaaagagttatccttg
gtcagtggaaaagctgcttggatggcatacttggaaatatactgtttggatgctgatggt
gctctctttgatgctgctttactatcagctgttgctgccttttctcattkaytgtgttgc
gttgacaaggcaaagaatgaaggaactacaaaagattttagatga
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