Quercus suber (cork oak): 111997891
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Entry
111997891 CDS
T05868
Name
(RefSeq) transcription initiation factor TFIID subunit 4b
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111997891
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qsu03021
]
111997891
03036 Chromosome and associated proteins [BR:
qsu03036
]
111997891
Transcription machinery [BR:
qsu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
111997891
Coactivators
SAGA/TFTC/STAGA complex
111997891
Chromosome and associated proteins [BR:
qsu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
111997891
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
3Beta_HSD
SPMIP10-like
Epimerase
Polysacc_synt_2
NAD_binding_10
KR
Motif
Other DBs
NCBI-GeneID:
111997891
NCBI-ProteinID:
XP_065631990
LinkDB
All DBs
Position
Unknown
AA seq
436 aa
AA seq
DB search
MAYIDICSKASLIIGSNSIYKNEGDGAFYGPNIDISVSDALNRKFQCAISVEVIEPAVKG
TLNVLKACLEAKVKRVVVVSSFAAVGMNPSWPKDQQLGTQIPSTTSSAGINARTPPKKPS
IGQKKPLEAHGSSPSLPSKKQKVSGAFSDQSIEQLNDVTAISGVNLREEEEQLFSGPKED
SRASEASRRVVQEEEERLILKKAPLQKKLAEIMAKSGLKCISTDVERCLSLCMEERMRGL
ISNLIRLSKQRVDIEKPRHRTVVTSDVQQQIMTMNRKASEEWEKKQAKAEKLRRLNDPEG
NNGVDGDKEKDNGCGKSLKTNKEEDDKMRTTAANVAAHAAVGRDDMLSKWQLMAEQARQK
CEGGVDTSGSQPSKDVSRKPLSTSGRKDNQETEKRGNAAPVAASTGTVRKSGRNQITLAQ
TRVARSISIKDVIAGF
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggcatatattgatatctgctcaaaagcctcgttgattataggttctaactccatctac
aaaaatgaaggagacggtgcattttatggtccaaatatagatattagtgtatctgatgca
ttgaataggaaattccagtgtgcaatttctgtagaagtgattgagcctgctgtaaagggc
acacttaacgtattgaaagcatgtcttgaagcaaaagttaagcgagttgttgttgtgtcc
tcttttgctgctgtgggcatgaatccaagttggcccaaggatcaacagttaggcactcaa
atcccatctacaacctcttctgctggtattaatgccaggacacctcccaaaaagccttct
attggccagaagaaaccactcgaagcacatggttcatcaccatctctgccaagtaaaaag
caaaaagtatctggggccttttcagatcaaagcattgaacaactaaatgatgtcactgct
atcagtggagttaatcttagggaagaggaagaacagctattttctgggcccaaggaggac
agtcgagcttcagaagcatctcgaagagttgtgcaagaagaagaagaaaggctgattttg
aagaaagctcctctccaaaaaaagctggctgagatcatggccaaaagtggtttgaagtgt
ataagcaccgatgtggagcgatgcttgtcactgtgcatggaggaaagaatgcgcggacta
ataagtaatctaatcagactgtcaaaacagcgggttgatattgagaaaccaagacaccga
actgttgtcacctcagatgttcaacaacaaatcatgacaatgaataggaaagctagcgag
gaatgggaaaaaaaacaggctaaagcagagaagctgcggagacttaatgatcctgagggt
aataatggagttgatggtgacaaggagaaagataatggttgtggtaaatcacttaagaca
aacaaagaggaagatgacaaaatgaggacaacagcggcaaacgttgcagcccatgctgct
gttggaagagatgacatgctttcaaaatggcaactaatggctgagcaagcccggcagaaa
tgtgaaggaggggtggatacatcaggttctcaaccaagtaaagatgtgagtcgcaagcct
ttatcaacatctggaagaaaggacaaccaagaaacagagaaaaggggcaatgcagctcct
gttgctgcttctactgggactgttagaaaatctggaaggaatcaaattactctggctcaa
actagggttgctcgtagcatctccattaaagatgtgattgcagggttctaa
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