KEGG   Quercus suber (cork oak): 111998273
Entry
111998273         CDS       T05868                                 
Name
(RefSeq) polyubiquitin isoform X1
  KO
K03873  elongin-B
Organism
qsu  Quercus suber (cork oak)
Pathway
qsu04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:qsu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    111998273
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:qsu04121]
    111998273
   03400 DNA repair and recombination proteins [BR:qsu03400]
    111998273
Ubiquitin system [BR:qsu04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Adoptor protein
     111998273
   Cul5 complex
     111998273
DNA repair and recombination proteins [BR:qsu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     111998273
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 Dsc3_N UBL_UBAC1 Rad60-SLD_2 DUF2604
Other DBs
NCBI-GeneID: 111998273
NCBI-ProteinID: XP_065625147
LinkDB
Position
Unknown
AA seq 110 aa
MAMYIRVKRSKTTYFIRCDPTETVLDIKEKLQVLIDQPVNNQRLILVGTGEVLEDSKTLA
DHKVENDSVVALTLRKGGLLNSFLSDFYASPVYYWVPLCIFYVADRSLNS
NT seq 333 nt   +upstreamnt  +downstreamnt
atggctatgtatatccgagttaagcgtagtaagacaacttacttcatacggtgtgatcct
actgaaacagttctagacataaaggagaaattgcaagtcctcattgatcaaccagttaac
aatcagcgtttgatcctagttggtactggggaagttttagaggattcaaagacattggca
gatcataaggttgaaaatgattcagttgtggcactgaccttgagaaaaggtggtcttctt
aattctttcctctctgatttttatgcatcacctgtgtactactgggtacccttgtgcatt
ttttatgttgctgataggagtctgaacagctaa

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