Quercus suber (cork oak): 111998306
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Entry
111998306 CDS
T05868
Name
(RefSeq) WD-40 repeat-containing protein MSI1
KO
K10752
histone-binding protein RBBP4
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu03082
ATP-dependent chromatin remodeling
qsu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111998306
03083 Polycomb repressive complex
111998306
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
qsu03036
]
111998306
Chromosome and associated proteins [BR:
qsu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
111998306
Histone modification proteins
HAT complexes
HATB complex
111998306
HDAC complexes
Sin3A-HDAC complex
111998306
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
111998306
PRC2.2
111998306
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
111998306
Heterochromatin formation proteins
Other heterochromatin formation proteins
111998306
Chromatin remodeling factors
NuRD complex
111998306
NuRF complex
111998306
NuRF complex (fruit fly)
111998306
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1C_H4-bd
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
EIF3I
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
WD_LRWD1
Beta-prop_RIG_1st
eIF2A
MIOS_WD40
Beta-prop_WDR19_1st
Beta-prop_HPS5
NBCH_WD40
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_NUP159_NUP214
Beta-prop_TEP1_C
Motif
Other DBs
NCBI-GeneID:
111998306
NCBI-ProteinID:
XP_023886175
LinkDB
All DBs
Position
Unknown
AA seq
423 aa
AA seq
DB search
MGKDEEEMRGEIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKD
YSVQKMILGTHTSENEPNYLMLAQLQLPLDDAENDARHYDDDRSDFGGFGCANGKVQIIQ
QINHDGEVNRARYMPQNPFIIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHNTE
GYGLSWSKFKQGHLLSGSDDAQICLWDINASPKNKTLDATQIFKVHEGVVEDVAWHLRHE
YLFGSVGDDQHLLIWDLRTPSVSKPVQSVIAHQSEVNCLAFNPFNEWVVATGSTDKTVKL
FDLRKITTALHTFDCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAE
DGPPELLFIHGGHTSKISDFSWNPCEDWVVASVAEDNILQIWQMAENIYHDEDDLPEEST
KAA
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggggaaagacgaagaggagatgaggggagagatagaggagaggctgataaacgaggag
tacaagatctggaaaaagaacacgccttttctctacgatctggtcatcacgcacgccttg
gagtggccttctcttaccgtcgagtggttgcctgaccgcgaggagccgccagggaaggac
tattccgtccagaagatgattctcgggactcatacttccgagaatgagcccaattacctc
atgcttgctcagctgcagctcccgttagatgatgccgagaacgacgcccgccattacgat
gacgaccgctctgatttcggcggctttggctgcgctaatgggaaggttcaaataattcag
caaataaatcatgatggggaggttaatcgtgcacgatatatgcctcaaaacccatttatt
attgctactaagacagttagtgcagaagtttatgtttttgattatagcaaacacccatct
aagcctccgctagatggtgcatgcagtccagacttaagattaaggggccataacactgaa
ggatatggtttgtcgtggagtaagttcaagcagggtcatttactgagtggctctgatgat
gctcagatatgcttgtgggatattaatgcaagtcctaagaacaagacccttgatgccacg
caaatttttaaggttcatgaaggtgttgtagaagatgtagcatggcatctgaggcatgaa
tacttatttggctctgttggcgatgatcagcacctgcttatatgggatcttcggactcca
tcagtgagcaagcctgtccaatctgttattgctcatcaaagtgaggtaaactgcctagct
ttcaatccctttaatgaatgggttgttgcaacggggtctactgataaaactgttaagttg
tttgatcttcgcaagattaccactgcacttcacacctttgactgtcacaaggaggaggtt
ttccaagttggctggaatccaaagaatgagaccatattagcatcttgttgtcttggtagg
agacttatggtgtgggatctgagcaggattgatgaagagcaaacaccagaggatgctgaa
gatggaccgccagagttgctttttattcatggcggtcacacgagtaaaatatctgatttt
tcctggaacccatgtgaagattgggttgttgctagtgtagctgaagacaacatacttcaa
atctggcaaatggcagagaacatctatcatgatgaagatgatttaccagaagaatccaca
aaggctgcttag
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