Quercus suber (cork oak): 111998801 Help Entry 111998801         CDS       T05868                                  Name (RefSeq) vacuolar sorting protein 39   KO K20183   Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 Organism qsu  Quercus suber (cork oak) Pathway qsu04148   Efferocytosis Brite KEGG Orthology (KO) [BR:qsu00001]  09140 Cellular Processes   09141 Transport and catabolism    04148 Efferocytosis     111998801  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:qsu04131]     111998801 Membrane trafficking [BR:qsu04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     111998801 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Vps39_1 CNH zf-Vps39_C Clathrin TPR_19 zf-HC5HC2H AlaDh_PNT_N Motif Other DBs NCBI-GeneID:  111998801 NCBI-ProteinID:  XP_023886679 LinkDB All DBs Position Unknown AA seq 1008 aa AA seqDB search MVHSAYDSFQLLSDCPTKIDAVESYGSKLLLGCSDGSLKIYAPDPSGSDRSPPSDYLPQA QDLRREPYVLERNVAGFSRRPLISMEVLESRELLLSLSESIAFHRLPSLETNAVITKAKG ANVYSWDDRRGFLCFARQKKVCIFRHDGGRGFVDMKEYGVPDVVKSMSWCGENICLGIRK EYMILNATNGALSEVFPSGRLAPPLVISLPSGELLLGKENIGVFVDQNGKLLHEGRICWS EAPAQVVIQNPYGIALLPRYVEIRSLRDPYPLIQTVVLRNARHLHQGNNAVIVALDNSVY GLFPVPVGAQIVQLTASGNFDEALALCKLLPPEDASHRAAKEGSIHIRYAHYLFDNGSYE EAMEHFLASQIDITYVLSLYPSIILPKTTLIPEPEKLMDISLDASYLSRASSGLSDDMEI SPLPQLLESDENAALESKKMSHNTLMALIKFLQKKRYSVIEKATAEGTEEVVLDVVGDNF ASFDSSRFKKSTKGRGNISIGSGAREMAAILDTALLQALLLTGQSSAVLDLLKGLNYCDM KICEEILQKGNHYAALLELYKCNSMHREALKLLYRLIEESKSNQSIAELTQKFKPESIIE YLKPLCGTDPMLVLECSMLVLESCPTQTIELYLSGNIPADLVNSYLKQHAPNMQAKYLEL MLAMNENGISGNLQNEMVQIYLSEVLEWYADLSAQEQWDEKAYSSTRKKLLSALESISGY NPEALLKRLPPEALYEERALLLGKMNQHELALSLYVHKLHVPELALAYCDRVYEPVVHQP SVKSSGNIYLTLLQIYLNPRRTTKNFEKRITNIVSPLNTSIPKVVPGTSVKAKVGRGNKK IASIEGAEDMRVSQSSTDSSRSDGDVDESTEEGGSAIMLDEILDLLSRRWDRLNGAQALK LLPRETKLQNLLPFLGPLLRKSSEAYRNLSVIKSLRQSENLQVKDELYNQRKTVVKITGD SLCSLCNKKIGTSVFAVYPNGKTLVHFVCFRDSQSMKAVAKGSPLRRR NT seq 3027 nt NT seq  +upstreamnt  +downstreamnt atggtacacagtgcctacgattccttccagctcctcagcgattgccccaccaaaatcgat gccgtcgaatcgtacggctcaaagctactcctcggctgctccgatggatcccttaaaatc tatgccccagacccctccggctccgaccgctctccaccgtccgattacctccctcaggcc caagatctgcgcagggagccgtacgtactggagagaaacgtggctgggttctcgagaagg cctctaatctcgatggaagtgttggagtcgagagagctccttctatcgctctcagaatcg atcgctttccatagactcccaagtttggagaccaacgctgtgatcaccaaagccaagggc gccaatgtgtattcttgggacgatcggagaggctttttgtgcttcgcgaggcaaaagaaa gtctgtattttcagacatgacgggggtcggggatttgtggacatgaaagaatatggtgtt ccggatgtggtgaagtcaatgtcttggtgtggtgagaatatatgtttgggtatcagaaaa gaatacatgatactgaatgctacaaacggtgcgttgtctgaagtatttccttctgggagg ctagccccacctttagtgatttctcttccttcaggggagcttcttcttgggaaggagaac attggtgtctttgtggaccaaaatggaaagcttcttcatgaaggtaggatttgttggtca gaggcccctgcacaagttgtcattcagaacccatacggaatagctttattaccaagatat gttgagattcggtctcttcgagatccttatccactcatacagactgttgttctcagaaat gctcgtcatcttcaccaaggcaacaatgctgtaattgttgcactggataattctgtttat gggctcttcccagttcctgttggtgcacagattgtacaattaacggcatctggcaatttt gatgaagctttggccttgtgtaagctgcttccaccagaagatgctagccatagagctgca aaggagggttcaattcatataagatatgctcactacctctttgataatggaagctatgag gaagccatggagcattttttggcatctcaaatagatataacctatgtactttctttgtat ccatctattatccttcctaaaacaactctaattcctgagccagagaagcttatggacatc tctttggatgcttcatatctctcaagagcttcatctggtttatcagatgatatggaaatc tcaccattaccacagcttttggaatctgatgagaatgcagcacttgagtcaaagaaaatg agccataatactctcatggctcttattaagtttttacagaagaagagatacagtgtaatt gaaaaggccactgcggagggaacagaagaggtggttttagatgttgttggagataatttt gcctcatttgactctagtcggttcaagaaatcaaccaaggggcgtggcaatatttccatt ggctctggtgctcgggagatggcagcaatacttgacacagcactactccaagctctgctt ctgactggacagtcttcagcagttttagacttactgaaaggtctcaattactgtgatatg aaaatatgtgaggaaattcttcagaaagggaatcattatgctgctttgttagaactttac aagtgcaattcaatgcaccgtgaagctcttaaacttctttatcgattgatagaagagtca aaatcaaaccaatcaatagctgaacttacccaaaagtttaagcctgagtcaattattgaa tatctcaagcctctgtgtgggactgatcccatgcttgttctggagtgttcaatgcttgtt cttgaaagctgtccaacccaaactattgagttgtatttgtctggaaatattccagcggac ttggtcaactcttatttgaagcaacatgctccaaacatgcaggccaagtacttagaactc atgcttgcaatgaatgagaatggtatctcaggaaatctgcagaacgaaatggtgcaaata tatctctcggaagtacttgaatggtatgcagatttaagtgctcaagagcaatgggatgag aaagcatattcctcaacaaggaagaagttgttgtctgctttagagagtatctctggatat aacccagaggctttgttgaaacgtcttcctccagaagctttatatgaagagcgtgcacta ttgttgggtaaaatgaaccaacatgagcttgccttatctctttatgttcataagcttcat gttcctgagctggcgctggcctattgtgatcgggtatatgagcctgtagttcatcaacca tctgtaaaatcttctggcaatatatacctcactcttctgcaaatttatctgaatcctcgg aggacaaccaagaactttgaaaagcgaattacaaatatagtatcacctctgaatacaagc attccaaaggttgttccagggacttcagttaaagctaaagtagggcgtggaaataagaaa attgcttctatagagggtgcagaggacatgcgagtcagtcagagcagtaccgacagcagt aggagtgatggtgatgtggatgaatctactgaggaaggaggttctgctattatgcttgat gagatccttgatctgttgagccgaaggtgggatagactaaatggagctcaagcactcaaa cttttaccaagggaaaccaaactacagaacttgcttccatttcttggacctcttctgcga aaatccagtgaagcatacagaaatctttcggtaatcaaaagtttgagacagagtgagaac ctgcaggtgaaggatgagctttacaaccaaaggaagacggtggtgaagatcaccggtgat agtttgtgctctctttgcaataagaagatagggacaagcgtttttgcagtctaccccaat gggaagacacttgtgcactttgtttgctttagagactcgcagagtatgaaagccgtggcc aaaggctccccgctaaggaggcgatga

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