Quercus suber (cork oak): 111998992
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Entry
111998992 CDS
T05868
Name
(RefSeq) single-strand DNA endonuclease 1 isoform X1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
qsu
Quercus suber (cork oak)
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
qsu03400
]
111998992
DNA repair and recombination proteins [BR:
qsu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
111998992
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Chromo_SEND1
XPG_I
XPG_N
Chromo_2
Chromo
XPG_I_2
Pox_G5
Chromo_shadow
Motif
Other DBs
NCBI-GeneID:
111998992
NCBI-ProteinID:
XP_023886890
LinkDB
All DBs
Position
Unknown
AA seq
590 aa
AA seq
DB search
MGVKNLWDILESCKKTLPLHHLQNKRVCIDLSCWMVQLQNVSKSHSCIKQKVYLRGLFHR
LRALIAVNCTVVFVTDGSIPAIKLSTYRRRLNSGSEVTQDDRNLQNITSLRRNMGSEFSC
MIKEAKILGMALGIACLDGIEEAEAQCALLNSESLCDGCFTSDSDVFLFGARTVYRDICL
GDGGYVTCYEMTDVERRLGFGRNSLITLALLLGCDYSQGVHGLGPESACQIVKSVGDNVV
LQKVASEGLSFVKKKRSSKKQGAVSKCNNSKENPLDHDMNVNGSKHDSQRDDQHLQVIDA
YLKPKCHSADSDAVHRALAQYPFQRAKLQQICAQFFEWPLDKTDEYILPKIAERNLRRFC
NLRSTSSDLGLKLPLHKIPVKCPVSKIIKHRKVQGRDCYEVSWEDLDGLKTSIVPADLVE
SACPEKIVEFEEERAEMKKQNHRKTRPKKSEKGSSVTEIDLKLQRLLLDIELESSSVHNA
SFSSNVEISESRTAAPEVDLTNQDLWLDPKSSDNISCNEVGPSTAKSEVIDLLSPSPPRQ
SRIVSKFPKSNGQCIDVIDLSESETDVSPEHERKARELRLFLASIRDEIS
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtgaagaacttgtgggatatcttggaatcatgcaagaaaactctaccacttcac
catctccagaacaagagggtgtgcatagatctctcttgctggatggttcagcttcaaaac
gttagcaaatcacactcttgtataaaacagaaggtttatctcagaggtctctttcaccgc
ctcagagctctcattgctgttaattgcaccgttgtttttgttacagatggatccattcct
gctattaagttatcaacttatagacgccgcttaaattcaggaagtgaggttactcaagat
gatagaaacttgcaaaatattacctctctacgaagaaatatgggatctgagttttcatgc
atgataaaagaggctaaaattttgggcatggcacttggcattgcttgcttagatgggatt
gaggaagctgaagcacagtgtgcattgctaaactcagaatcattatgtgatggatgtttc
acttcggactcagatgtctttctttttggtgcaaggactgtgtacagagatatatgcctt
ggagatggtggttatgtcacttgctatgaaatgacagacgtagagagacggcttggattt
ggaaggaactcattgattacccttgcactacttcttggctgtgactactctcaaggagtt
catggtctgggtcctgagtccgcttgtcagattgttaaatcagttggagacaatgttgtc
cttcaaaaagttgcctctgaaggactgtcctttgtaaaaaagaaaagaagttcaaagaaa
cagggggctgtttccaagtgcaataatagcaaggagaacccactggatcatgatatgaat
gttaatggaagtaagcatgattcacaaagggatgatcagcacttgcaagttattgatgca
tatttgaagcccaagtgccactcggcagattctgatgctgtgcatagggctcttgctcaa
tatccttttcaacgtgccaaacttcagcagatatgtgctcagttttttgagtggcctctt
gataaaacagatgagtatatccttccaaagattgctgaacgcaacttacggcgattttgt
aatttgcgatcaacttcatcagatctaggactgaagcttccattacacaagataccagtt
aaatgccctgtctcaaaaattatcaagcatcgaaaggttcagggaagagattgttatgag
gtctcatgggaggatttagatgggcttaagacctccatagtgccagcggatcttgtagag
agtgcttgtcctgagaagattgtggaatttgaggaggaaagagctgaaatgaagaaacaa
aatcacaggaaaacaaggccaaagaaatcagaaaagggatcttctgtgactgaaattgat
ctaaaactccaaagactattacttgacatcgaattagaaagcagttctgttcacaatgcc
tccttttcttcaaatgtggagatatcagaaagccgtactgctgcaccagaagttgattta
acaaaccaagatctgtggcttgatccaaagagcagtgacaatatatcttgcaatgaagtt
ggtccaagtactgctaaaagtgaggttattgatctcttaagcccttccccgccaagacaa
tcccgtatagtatccaaatttccaaaatcaaatggtcaatgtattgacgtaattgatttg
agtgaatcagaaactgatgtgtctcctgaacatgagaggaaggcaagagagttaagattg
ttcttagccagcattagggatgaaatctcttga
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