Quercus suber (cork oak): 111999234
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Entry
111999234 CDS
T05868
Name
(RefSeq) uncharacterized protein LOC111999234
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111999234
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
qsu03032
]
111999234
03400 DNA repair and recombination proteins [BR:
qsu03400
]
111999234
DNA replication proteins [BR:
qsu03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
111999234
DNA repair and recombination proteins [BR:
qsu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
111999234
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PTCB-BRCT
BRCT
BRCT_2
LIG3_BRCT
TopBP1_BRCT0
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
111999234
NCBI-ProteinID:
XP_023887123
LinkDB
All DBs
Position
Unknown
AA seq
991 aa
AA seq
DB search
MMKTKTFKGANVFMSRNLVPPEIFDTLHDALKHNGADVFLCCDPSRSAPNDYHIISSPDH
EKFLDLRAKGCNLLGPQCVLSCAKENRALPKQGYTCCFAMDGVKVLASGFEADEKVKIET
LVTAMGGVLHPKASLDVSFVIVKNVLAAKYKWALNILKKPIVTIEWLHQCWNEHRVVPQE
SFRVLPFSGLTICVTQIPADERKEIEKLITQNGGKYSAELTKKCTHLICDAAEGDKYKVA
RRWGHIYIVTRKWFYQSIARRACLNEDSYPVQGGSVSSNKHVRNRLTLQHSLDKGIGNSQ
SVPSTSEDLNSQAAPSIGFADSDLEATLSQNVSSAISDPPVFVKEGDFEKPTMQPKDETS
LDGFVANDSQSEDGDLYLSECRILLVGFEVSEMRKLVSMVRRGGGSRYMSFNDKLTHIVV
GSPSEIEKKEVRSLAALGVIYVVKPTWLEDCDCKKKEIPVLQRYIAYDLLLPKDSVFSTK
GAVIGVASLNQSKNSTAHPSMSSDQVLGNRNSGIGLPSLEKNKEERSEINTNGDSSLKAT
AKFSEKIQLPVINGKDNGQLTDKKKGRQKTQHDSSVKNGKPSSVFKGRVFCFSKSFPEDR
RAEIVQWVVQGGGKVVDDPVKQYMHYTIQCHGVITRSVDAPQTTCVSSHWIRSCLEEEYL
LDVGSHILYSPLPCRIPLPGFERFRVCVSQYEEKDRQLIRNLCFVLGAKFAEKLTKKVTH
LLCKFTNGPKYEAACKWGIHSITSEWIYECIRQNEVVALDSFCPKEVTVQDQEAGLCTTS
QFPTQAVRMVSGDSPSCFPSQSQDLRNTATQCTFSRNDSFKEESEQSSVFNKRAKLLEDD
EQKDLPSSKVHLRDPINLNAIGDNITKDNGEVSHAVPDVAAAIEDLLEQTSKIHDQNSPG
RTGCDKNLFSSDYSILVRDHSDAHSVVGLSKHWLNRTGKNDDVCNPSGDRSAGIYDGFSE
TQTESQVVGYEEDLSGRQMLIDKVRTRSSLT
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagacgaagacattcaagggtgccaatgtgttcatgtcgcgcaacctggtgcct
cctgaaatcttcgacactcttcacgacgccctcaagcataacggcgccgacgtcttcctc
tgctgcgatccttctcgctccgcccctaacgattaccatatcatctcttcccccgatcac
gagaaatttctggaccttagagccaaaggttgcaatttacttggtcctcaatgtgttctt
tcctgtgcaaaagagaatagagctttgcctaaacaagggtacacttgttgctttgcaatg
gatggtgtcaaagtactcgcatctggttttgaggcggatgaaaaggttaaaatagaaaca
ttagtaacagcaatgggaggagtgttgcatcctaaagcatccctggatgttagctttgtc
attgtgaagaatgttctggctgcaaaatacaagtgggctttaaatattctgaagaaacca
attgtcacaattgagtggttgcatcaatgctggaacgagcaccgtgttgttcctcaggaa
tcattcagagttcttcctttttctggattgacaatttgtgtgacccaaattccagcagat
gagcgaaaggagattgaaaagcttattacacaaaatggtggaaaatattctgctgaactg
accaagaagtgcacacatttgatttgtgatgctgctgaaggtgacaaatacaaggttgcc
cgacgatggggtcatatttatattgtaactcggaaatggttctatcaatccattgctaga
agagcttgtttaaatgaggactcctatcctgttcagggtggttctgtatcttcaaataaa
catgtaaggaatcgcctgactctgcagcatagcctagacaagggtattggaaattcacag
tctgtgccatccacatcggaagatttaaactctcaagctgctcccagcattggttttgcg
gattcagatctagaagccactctgtcgcagaatgtgtcttctgctatttcggatcctcct
gtctttgttaaggagggggattttgaaaaacctaccatgcagcccaaagatgagacaagc
cttgatggttttgttgccaatgattctcaatctgaagatggtgatctatacttgtcagag
tgtagaatattacttgttggctttgaagtttctgaaatgcgtaaactagttagtatggtg
cgtagaggtggaggatcccggtatatgtcattcaatgataaattgacacacatagtagtt
ggatctccttcggagattgagaaaaaggaggtaaggagccttgcagctttgggtgtcatt
tatgtagttaaacccacctggctagaggattgtgattgcaaaaagaaagagatccctgtt
ctacagagatacatagcctatgatctacttcttccaaaagattctgtcttctccacaaaa
ggagcagtgattggagtagccagcttaaatcaaagtaaaaactccacagctcatcctagc
atgtcatccgatcaggtactggggaataggaactctggaattggattgccgtcattggag
aaaaacaaagaagagaggtcagaaatcaacacgaatggagacagttctcttaaagcaacg
gcaaaattttctgagaaaattcaacttcctgttataaatggtaaagataatggtcaattg
acagataaaaaaaaaggtcggcagaagacacaacatgattccagtgttaaaaatgggaag
ccatcaagtgtgttcaaggggagagtattttgcttctcaaaatcctttcctgaggatagg
agggctgaaattgttcaatgggtagttcaaggaggaggaaaggtagtggatgatcctgtg
aaacaatatatgcactataccattcagtgtcatggtgtaataaccaggtctgtagacgct
ccccaaaccacatgtgtatccagtcactggatccggtcttgtttagaggaggaatacttg
ctggatgttggcagtcacattctctattctccacttccctgccggattcccttgcctggg
tttgagagattccgagtctgtgtttcacaatatgaggagaaagatagacaactaataaga
aacttgtgttttgttctcggagctaaatttgcggaaaaacttactaaaaaggttacccat
ttattatgtaaattcaccaatggaccaaagtatgaggctgcttgtaaatgggggatacac
tcaattacatcagagtggatatatgagtgtatcaggcagaatgaagttgttgctctggat
tcattttgcccaaaagaggtcactgttcaagaccaagaggcaggattgtgtaccacgagt
cagtttcctacacaagctgtgcggatggtatctggagatagtccctcttgctttcctagt
caatcacaagacctaagaaacacagcaactcagtgtacctttagcagaaatgacagcttt
aaggaagaatctgaacaatcaagtgtgttcaacaagagggcaaagcttttggaagatgat
gaacaaaaggatctaccttcctctaaagtacatttaagagatcccatcaacttgaatgcc
attggagataacataacaaaagataatggggaagtttctcatgctgttcctgatgttgct
gctgctattgaggacttgttggagcagacaagcaagattcatgatcagaattcaccagga
aggactgggtgtgataaaaatcttttctcatctgattattcaatccttgttcgagaccat
tcagatgctcactctgtcgttggcttgtctaaacactggttaaacaggactgggaaaaat
gatgatgtttgcaatccttctggagatagaagtgcaggaatatatgacggttttagtgaa
acacaaacagagtctcaggttgttggttatgaagaagatttgtcaggcaggcaaatgctt
atagacaaagttcgaacacgaagtagcttaacttga
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