Quercus suber (cork oak): 112000296
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Entry
112000296 CDS
T05868
Name
(RefSeq) vegetative incompatibility protein HET-E-1
KO
K14829
pre-rRNA-processing protein IPI3
Organism
qsu
Quercus suber (cork oak)
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
qsu03009
]
112000296
Ribosome biogenesis [BR:
qsu03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
112000296
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WDR55
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_Vps41
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
NBCH_WD40
WD40_MABP1-WDR62_2nd
EIF3I
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_IP5PC_F
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Beta-prop_NWD2_C
Beta-prop_TEP1_C
WD40_CFAP43
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
112000296
NCBI-ProteinID:
XP_065624197
LinkDB
All DBs
Position
Unknown
AA seq
319 aa
AA seq
DB search
MSSSSPHEIVLTSSPDGPIIAYDASSGALLAHFTGTQTPRQGLTLVGNSTLIAASHISSA
TASGSIHLYNWWSSTVFHHLPLPEPVAPLIASLDGFYLFAGGLSGNIHVFSLPLASGNVL
KAFPAHHSPVSCLKISDDGSLLISGGDDGTIVVIPISQLIGASSSTDENASNFILHRFAQ
KHGGAIMSLVMMNEGQNLISAAEDGSVWVWEAVTGQVIMALQNEMGSISHMVVATGRGAR
MGSSGSNESTGNWSLGLSGTGRELSLQVKQTQEMEDMLTVVAKDRSKAIDMLESAIEMYE
RLLELILKEAKKGTSNGGE
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcttcttctccacatgaaattgtcctcactagctctcctgatggccccattatc
gcctatgatgcatcttcaggtgctcttctagcccacttcaccggcacccaaacacctcgt
caaggcctcacccttgtgggaaacagcactttgattgctgcctctcatatctcctcagcc
acagcttctggttccattcacctctacaactggtggtcttcaactgtcttccaccacctt
cctctccctgaacctgttgctcccctcattgcctctcttgatggcttctatctctttgct
ggtggcctttcaggtaatatccatgtgttctcactacccttagcttcagggaacgtactc
aaagcatttcctgctcaccacagtcctgtatcttgcctcaaaatcagtgatgatggatca
cttctcatttcgggtggtgatgatggtaccattgttgttatcccaatctctcaacttata
ggggcctcctcatcaacagatgagaatgcaagcaacttcatattgcacaggtttgctcaa
aagcatggtggggcaatcatgtctttggtgatgatgaatgaggggcagaatttgatttct
gctgcagaagatggaagcgtttgggtttgggaagccgtaacaggacaggtcattatggct
cttcaaaatgaaatgggaagcattagtcatatggtggtggccactgggcgtggtgctaga
atgggtagtagtggaagtaatgaatcaactgggaattggagtctcggtttatctgggact
ggtagagagttgagtttgcaggtaaagcaaacacaagaaatggaagatatgttgaccgtg
gtggcaaaggataggagtaaagctattgatatgcttgaatctgctattgaaatgtatgag
aggctcctggagctcatcctcaaagaggccaagaaaggtactagcaacggtggtgagtaa
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integrated database retrieval system
