Quercus suber (cork oak): 112000634
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Entry
112000634 CDS
T05868
Name
(RefSeq) uncharacterized protein LOC112000634
KO
K12817
pre-mRNA-splicing factor 18
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112000634
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
qsu03041
]
112000634
Spliceosome [BR:
qsu03041
]
Complex C
Other components
Step II factors
112000634
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Prp18
PRP4
LAGLIDADG_2
Motif
Other DBs
NCBI-GeneID:
112000634
NCBI-ProteinID:
XP_023888555
LinkDB
All DBs
Position
Unknown
AA seq
411 aa
AA seq
DB search
MDLLKQEILKKKQSLKEDTGGRKFFKRSELEQKQIQKLRDQEKLELQAKSNRQSSSSTTN
TNASATANTSSTTDSTTVAATSSLTEEQNIDNLVLPRHEVIRRLRFLKQPITLFGEDDTA
RLDRLKYVLKNGLFEVDSDMTEGQTNDFLRDIVELRKRQRSGMMSERKRQKGEEEKTEDK
DGGGGEDELSGGEGGSDGGVDNDKDLKRMKANFDELCEEDKILVFFKRLLTEWRQELDEM
GEAEKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDIRQALMLVVECCLKRDYLAGM
DHYIRLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQ
RRYPALPSKAVEFNSLANGSDLQSLLAEERISGGNLASEERLRIMPAPNES
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggacctactgaagcaagagatcctgaagaagaaacaatctctgaaagaagacacaggc
ggccgtaaattcttcaagcgctccgagctcgaacagaaacaaatccagaagcttcgcgac
caagagaaactcgaactccaagccaaatctaaccgccaatcctcttcttcaaccaccaat
accaacgcctccgccaccgccaatacatcctccacaaccgactccacaaccgtcgccgcc
acgtcatcccttaccgaggaacaaaacatcgataacctcgttctccctcgacatgaagtg
atccgccgcctccgtttcctcaagcaaccgatcactctcttcggcgaggacgatacggct
cggctcgaccggttgaagtacgtgcttaaaaacggtctcttcgaggtcgatagtgatatg
actgaaggacagacgaatgactttcttcgcgatattgtggagctgaggaagcggcagagg
agtgggatgatgagcgagaggaagaggcagaaaggagaggaggagaaaacggaggataaa
gacggaggtggaggagaagatgaattgagcggcggagagggtggatctgacggtggtgtc
gataacgataaggatttgaagcgaatgaaggcgaatttcgatgaattgtgtgaggaggat
aagattctggtgttctttaagaggctattgactgagtggcgccaggaattggatgagatg
ggcgaggccgagaagcggaccgccaaggggaagtctatggtggccacttttaagcagtgt
gctcggtatttgaatccgctgttcaagttttgcaggaagaaggttcttcctgatgatatt
cgccaagcattgatgttggtggttgaatgctgcttgaagcgagactacttggctggaatg
gaccattatattaggctcgccattggaaatgcaccttggcctattggtgtcactatggtt
ggtatccatgaacgttctgcccgtgagaagatctacaccaatagtgtggcccacattatg
aatgatgagacaactaggaagtacttgcaatcagtgaagagattgatgaccttttgccaa
cgacggtacccagcattgccatccaaagctgttgagttcaacagcctggcaaatggtagt
gacttacaatctctgctagcagaagagaggatttctgggggtaatctagcctctgaggaa
aggcttcggataatgcctgctccaaatgagagctag
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