Quercus suber (cork oak): 112001572
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Entry
112001572 CDS
T05868
Name
(RefSeq) probable indole-3-acetic acid-amido synthetase GH3.6
KO
K14487
auxin responsive GH3 gene family
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
112001572
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Motif
Pfam:
GH3
GH3_M
GH3_C
Motif
Other DBs
NCBI-GeneID:
112001572
NCBI-ProteinID:
XP_023889520
LinkDB
All DBs
Position
Unknown
AA seq
585 aa
AA seq
DB search
MNLTDDEEILKKLEDSTKDATCRQLETLRSILEHQSKGGGVRYLRPYLQGYDAPVDANTF
RRAVPLSSYEDYVDHINQMANNGPVDHDHDQPLLSVDPLICFFYSSGASTMKPKLIPYFD
SKLSRAASFIAHQGSNAIHRRLFPPRPSVNKVLWFIYADNITTTKGGFKVMAASSYPMHS
SKANWSQLVSSSSPREVILGSNIEHQMYCHLLCGLRNSDSIDGIRAPYAISLMNVFSLLE
SKWEQLCDDLEHGVPSSEISDVVMKDSVTEVLGGPQPELSRRIRVICEDKNWGGIVCKLW
PNVRYIRCVTTGSMMQYYPRLKHYAGEVPLLGGDYFASECCVGINLDTIQPPETTRFVLL
PTAAYFEFLPFALDEINVGEETVDISGVEEGKMYEVVVTTYRGFYRYRLGDIVRVVDFYN
SAPQVEYVMRAPKTSSEIITEKHLMSAMESFQRVIRKDMAAEISEFASFLDIMMSPKHLK
LYIEVREGSKLLQEEKLEESVEILKRCGSSIEDSLGGIYMVQRKRGELGPLAVSIVNPGS
FDRLSLVAIENGAPASQYKPPKIIRNRQIVDFMERCIVVTVSLEG
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgaccgacgacgaggagatcctgaagaagctggaggactcaaccaaggatgcc
acgtgtcgacagctcgagaccctaaggtccatcctcgaacaccaaagcaaaggcggcggc
gtacgttatctccggccttacctccaaggctacgatgcgccggttgatgcaaatacgttc
cgccgagctgtgccgctgtcttcctacgaggactacgttgaccacatcaatcagatggcc
aacaatggacccgttgaccatgatcatgatcaacctctcctgtccgttgatcctctcatc
tgtttcttctacagctcaggagcaagtaccatgaagcccaaattgatcccttactttgat
tcaaagctctcgagagccgcctcgttcatagctcaccagggcagcaatgcaattcatcgg
aggttatttcctcctaggccgtctgtgaataaggtcctatggtttatttatgctgataat
ataacaactaccaaaggtggttttaaggttatggctgcttcttcatatcctatgcatagc
agtaaggcgaactggtctcagttggtctcttcttcaagcccccgggaagtcattcttggg
tcaaacatagagcaccagatgtattgccaccttctttgtggccttagaaactctgattct
attgatgggattcgtgccccatatgccataagcttgatgaatgtgtttagtcttttagag
tccaagtgggagcagctatgtgatgatcttgaacatggagtcccaagttcagagatttcc
gatgttgtgatgaaagattctgttactgaagttcttgggggccctcaaccagaattgtca
aggagaattcgagtaatttgtgaggacaagaattggggtgggatagtttgtaaattgtgg
cctaatgtgcggtacattaggtgtgttaccacagggagtatgatgcagtattatccaagg
cttaagcactatgcaggagaggtacctttgttaggcggagactactttgcttcagaatgc
tgtgtgggtatcaacttggatactatacagcctcccgagacaacccgattcgtgttgctt
ccaactgcagcttattttgagtttcttccatttgctttggatgagatcaatgttggtgaa
gaaacagtggacatttctggtgtggaggaaggaaagatgtatgaagtggttgtcactaca
tatagaggattctaccggtatcgtttaggtgatatcgtgagagttgttgatttctataat
tctgctccacaagtggagtatgtgatgagagctcctaaaacttcgtccgagataataact
gagaaacatttgatgtctgcaatggaaagttttcaaagggtcatcagaaaagatatggca
gcagagatttcagagtttgcaagtttcttggacataatgatgagcccaaagcatttgaag
ctttatatagaagttagagagggaagtaagcttttgcaagaagagaagttagaggagtca
gttgaaattctcaagaggtgtggttcctctattgaggatagcttgggaggcatttacatg
gtgcagaggaaaagaggtgaattaggtcctttggcagtatccattgtaaatccaggtagc
tttgatagattatcattggtagccattgagaatggagcaccagctagtcaatataaacca
cccaagattataagaaatcgccaaattgttgacttcatggaaagatgtattgttgttact
gtatctttggagggttaa
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