KEGG   Quercus suber (cork oak): 112001740
Entry
112001740         CDS       T05868                                 
Name
(RefSeq) SWI/SNF complex subunit SWI3A
  KO
K11649  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
qsu  Quercus suber (cork oak)
Pathway
qsu03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:qsu00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    112001740
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:qsu03021]
    112001740
   03036 Chromosome and associated proteins [BR:qsu03036]
    112001740
Transcription machinery [BR:qsu03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     112001740
Chromosome and associated proteins [BR:qsu03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    112001740
   PBAF complex
    112001740
   GBAF(ncBAF) complex
    112001740
SSDB
Motif
Pfam: SWIRM SWIRM-assoc_1 Myb_DNA-binding Myb_DNA-bind_6
Other DBs
NCBI-GeneID: 112001740
NCBI-ProteinID: XP_023889687
LinkDB
Position
Unknown
AA seq 571 aa
MELTQRDPSSKPLRPDEPELDLYTIPSQSSWFLWDEIHDIERTELRDFFDGSSFTRTPKV
YREYRDFIINKYREEPTRRLTFTDVRKSLVGDISLLHKVFMFLEKWGLINFSANLGNSSN
VSSSSNSLVVVEDEEDKARVKVEGTIPNAVRVGASPNSPKPISATPIVGDSSGDAVESGF
KLPPLASYSDVFGDLVKQKGLVCGNCGGNCDSGHYKYTKGEFIICINCFKNQNYGENRSM
DEFKQIEHVENSSNQGAMWTEAETLLLLESVMKHGDDWELVAQNLQNKSKLDCIAKLIEL
PFGELMLGSSHRYGNFGGLNGNKNGANQIQLLSSELHESLKTEGQSHEQINEKEQNGDAV
DEGPPSKKQRVTSLSDAGGSLMKQVALISTMVGPEITAAAAGAAVTALCDENSLPRETFD
VDEDYISNGICSPTTSFEQERFLQDEDSKLTERSTQSETQDTSLKRDDIPLTVRIRASIG
TALGAAAARSKLLADQEDREIENLVAIIIETQMKKLHQKIKHFDDLELIMEKEYTEIEDL
KDSLLAERIEVLQRAVNAGICRWRDHFAVKS
NT seq 1716 nt   +upstreamnt  +downstreamnt
atggaactgactcaacgcgacccgagttctaaaccgctccgacccgacgaaccagagctc
gacctctacaccattccaagccaatctagttggtttttgtgggacgaaatccacgatatt
gagagaactgaactgagagatttctttgatggaagctcatttacaaggaccccaaaagta
tacagggaatacagggactttatcatcaataagtacagagaagagcctacaaggcggctt
actttcacagatgtccggaaatcactggtgggtgatattagtttgctacacaaggtgttt
atgttcttggagaagtgggggttgataaatttcagtgctaatttgggtaatagtagtaat
gttagtagtagtagtaatagtttggttgtggtggaggatgaggaggataaggctagggtt
aaggttgagggaactatcccaaatgcagttcgggtaggggcatcaccgaattcgccaaag
cctatttcagcaaccccaattgtgggggatagtagtggggatgcggttgagagtggattt
aaattgccaccgttggcatcgtattcggatgtttttggtgatttggtgaagcagaaaggg
ttggtctgtgggaattgtggtggcaattgtgattctggtcactataaatataccaagggc
gaattcattatttgcataaactgtttcaaaaatcaaaattatggagagaacaggtctatg
gatgaattcaaacaaattgagcatgttgaaaacagtagtaatcaaggagctatgtggact
gaggcagaaaccctacttcttttagaatcagttatgaagcatggggatgactgggagctt
gttgctcaaaatttgcaaaacaaaagcaagcttgattgtatagcgaaactcattgagctg
ccttttggagagcttatgttgggttcttcccacagatatggtaattttggtggcctcaat
ggcaacaagaatggtgcaaatcaaattcagttattgtcatctgagcttcatgaaagtctc
aaaacagaaggtcaatctcatgaacagataaatgaaaaagagcagaatggagatgctgtg
gacgaaggtcctccttcaaagaaacagcgcgtcacttccctttcagatgcaggtggttca
cttatgaaacaggtagctctcatctcaaccatggttggtccagaaatcactgctgctgca
gctggggctgctgttacagcgctttgtgatgagaactcattaccaagagagacttttgat
gttgatgaggattatatttctaatgggatatgttctcccactacaagtttcgagcaagag
agattccttcaggatgaagattctaagctgacggaaaggtccactcaatcagaaactcag
gatacatccctaaagagggatgatatacccctaactgtgcgaattagagcttccattgga
acagctcttggtgcagctgctgcccgttctaaattattagctgatcaggaagacagagag
attgaaaacttagtcgcaatcataatcgagacacagatgaaaaaattgcaccagaaaatc
aagcattttgatgatctagagctcataatggagaaggaatatactgaaattgaagatcta
aaagattctcttttagctgagcggattgaagtcttacaaagggcagttaatgctggtatc
tgtagatggagggatcactttgctgtaaaatcttaa

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