Quercus suber (cork oak): 112001740
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Entry
112001740 CDS
T05868
Name
(RefSeq) SWI/SNF complex subunit SWI3A
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112001740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qsu03021
]
112001740
03036 Chromosome and associated proteins [BR:
qsu03036
]
112001740
Transcription machinery [BR:
qsu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
112001740
Chromosome and associated proteins [BR:
qsu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
112001740
PBAF complex
112001740
GBAF(ncBAF) complex
112001740
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
112001740
NCBI-ProteinID:
XP_023889687
LinkDB
All DBs
Position
Unknown
AA seq
571 aa
AA seq
DB search
MELTQRDPSSKPLRPDEPELDLYTIPSQSSWFLWDEIHDIERTELRDFFDGSSFTRTPKV
YREYRDFIINKYREEPTRRLTFTDVRKSLVGDISLLHKVFMFLEKWGLINFSANLGNSSN
VSSSSNSLVVVEDEEDKARVKVEGTIPNAVRVGASPNSPKPISATPIVGDSSGDAVESGF
KLPPLASYSDVFGDLVKQKGLVCGNCGGNCDSGHYKYTKGEFIICINCFKNQNYGENRSM
DEFKQIEHVENSSNQGAMWTEAETLLLLESVMKHGDDWELVAQNLQNKSKLDCIAKLIEL
PFGELMLGSSHRYGNFGGLNGNKNGANQIQLLSSELHESLKTEGQSHEQINEKEQNGDAV
DEGPPSKKQRVTSLSDAGGSLMKQVALISTMVGPEITAAAAGAAVTALCDENSLPRETFD
VDEDYISNGICSPTTSFEQERFLQDEDSKLTERSTQSETQDTSLKRDDIPLTVRIRASIG
TALGAAAARSKLLADQEDREIENLVAIIIETQMKKLHQKIKHFDDLELIMEKEYTEIEDL
KDSLLAERIEVLQRAVNAGICRWRDHFAVKS
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggaactgactcaacgcgacccgagttctaaaccgctccgacccgacgaaccagagctc
gacctctacaccattccaagccaatctagttggtttttgtgggacgaaatccacgatatt
gagagaactgaactgagagatttctttgatggaagctcatttacaaggaccccaaaagta
tacagggaatacagggactttatcatcaataagtacagagaagagcctacaaggcggctt
actttcacagatgtccggaaatcactggtgggtgatattagtttgctacacaaggtgttt
atgttcttggagaagtgggggttgataaatttcagtgctaatttgggtaatagtagtaat
gttagtagtagtagtaatagtttggttgtggtggaggatgaggaggataaggctagggtt
aaggttgagggaactatcccaaatgcagttcgggtaggggcatcaccgaattcgccaaag
cctatttcagcaaccccaattgtgggggatagtagtggggatgcggttgagagtggattt
aaattgccaccgttggcatcgtattcggatgtttttggtgatttggtgaagcagaaaggg
ttggtctgtgggaattgtggtggcaattgtgattctggtcactataaatataccaagggc
gaattcattatttgcataaactgtttcaaaaatcaaaattatggagagaacaggtctatg
gatgaattcaaacaaattgagcatgttgaaaacagtagtaatcaaggagctatgtggact
gaggcagaaaccctacttcttttagaatcagttatgaagcatggggatgactgggagctt
gttgctcaaaatttgcaaaacaaaagcaagcttgattgtatagcgaaactcattgagctg
ccttttggagagcttatgttgggttcttcccacagatatggtaattttggtggcctcaat
ggcaacaagaatggtgcaaatcaaattcagttattgtcatctgagcttcatgaaagtctc
aaaacagaaggtcaatctcatgaacagataaatgaaaaagagcagaatggagatgctgtg
gacgaaggtcctccttcaaagaaacagcgcgtcacttccctttcagatgcaggtggttca
cttatgaaacaggtagctctcatctcaaccatggttggtccagaaatcactgctgctgca
gctggggctgctgttacagcgctttgtgatgagaactcattaccaagagagacttttgat
gttgatgaggattatatttctaatgggatatgttctcccactacaagtttcgagcaagag
agattccttcaggatgaagattctaagctgacggaaaggtccactcaatcagaaactcag
gatacatccctaaagagggatgatatacccctaactgtgcgaattagagcttccattgga
acagctcttggtgcagctgctgcccgttctaaattattagctgatcaggaagacagagag
attgaaaacttagtcgcaatcataatcgagacacagatgaaaaaattgcaccagaaaatc
aagcattttgatgatctagagctcataatggagaaggaatatactgaaattgaagatcta
aaagattctcttttagctgagcggattgaagtcttacaaagggcagttaatgctggtatc
tgtagatggagggatcactttgctgtaaaatcttaa
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