KEGG   Quercus suber (cork oak): 112002965
Entry
112002965         CDS       T05868                                 
Name
(RefSeq) splicing factor U2af small subunit B isoform X1
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
qsu  Quercus suber (cork oak)
Pathway
qsu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:qsu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112002965
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:qsu03041]
    112002965
Spliceosome [BR:qsu03041]
 Complex A
  U2 snRNP components
   U2 related factors
    112002965
 Complex B
    112002965
SSDB
Motif
Pfam: RRM_1 zf-CCCH zf_CCCH_4 DNA_alkylation
Other DBs
NCBI-GeneID: 112002965
NCBI-ProteinID: XP_023890899
LinkDB
Position
Unknown
AA seq 271 aa
MYQRPDMITPGVDAHGQPIDPRTIQTHFEEFYEDLFEELTKYGEIESLNVCDNLADHMVG
NVYVQFREEEHAANALRNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF
MHLKRISRELRRQLFGRYRRRHSRSRSRSRSPYRHRSYEERSHGGRGSSKSYDERDHYYE
SQSRRHRTTSPGHRRGRSRSRSPGERRNHSPVREGSEERRAKIEQWNREREQQQENANKV
RNDGENANMQNGDQYYGYQQQPPPQQEKYNY
NT seq 816 nt   +upstreamnt  +downstreamnt
atgtaccagcgccctgacatgatcacgcctggcgtcgacgctcacggccagcccatcgac
cctcgcaccattcaaacccacttcgaggagttctatgaagatctctttgaggagctcacc
aagtacggcgagattgaaagcctcaatgtctgtgacaaccttgccgaccacatggtgggt
aatgtctatgttcagttcagagaggaagaacatgctgcaaatgcacttcgcaatctgact
ggaaggttttatgctggccgtcccatcattgttgatttttctccagtgacagactttcgt
gaagccacttgtaggcagtacgaggagaacacttgcaaccgtggtggatactgcaatttt
atgcacttgaaaaggatcagcagggagttaaggcggcaattgtttgggaggtaccgacga
aggcacagccgcagtcgaagccgaagtcggagcccctacaggcatcgcagctatgaagag
cgctctcatgggggacgtggttctagcaaaagttatgatgaaagggatcattattacgaa
agtcagagcaggaggcacaggaccacaagccctggtcataggagaggacgaagcagaagc
aggagccctggggagaggaggaaccacagtccagttagggaaggcagtgaagagaggcgt
gccaaaattgaacaatggaatagggaaagagaacaacagcaagaaaatgctaataaggtc
aggaatgatggagaaaatgctaatatgcagaatggagatcagtactatggctaccagcag
cagccacctccacagcaagaaaaatataattactga

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