Quercus suber (cork oak): 112003166
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Entry
112003166 CDS
T05868
Name
(RefSeq) uncharacterized protein LOC112003166
KO
K12589
exosome complex component RRP42
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112003166
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsu03019
]
112003166
Messenger RNA biogenesis [BR:
qsu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
112003166
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
112003166
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
112003166
NCBI-ProteinID:
XP_023891114
LinkDB
All DBs
Position
Unknown
AA seq
287 aa
AA seq
DB search
MVGLSLGEKHFIQGGIAQDIRSDGRKRLTYRPINVETGVIPQANGSARIRMGATDVISTV
KAELGKPISLQPDKGKVSIYVDCSPTAAPMFEGRGGEELSTELSVALQRSLLGGKSGAGA
GIDLSSLVVVEGKICWDLYIDCLVVCSDGNLLDALGAAIKAALSNTGIPRVQVAAGASGD
EQPEVDISDEEFLQFDTSDIPVIVTLTKVGRHYIVDATTEEESQMSSAISISVNRKGHIC
GLNKRGGAGLDPSIVLDMISVAKHVSEQLMNKLDSEIAAAEAGEDES
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atggtgggactatctctgggagaaaaacacttcatacagggtggcattgctcaagacatt
cgttctgatggtcgaaaaagattaacttaccgtcctattaatgttgaaactggagttata
ccccaagctaatggttcagcaagaatcaggatgggggccacagatgttatttctactgtg
aaggctgaacttggaaagccaatttcactacaaccagacaaaggaaaggtttccatatac
gttgattgcagtccaactgcagccccaatgtttgagggtagagggggtgaggagttgtcc
acagaactctcagttgctcttcaacgttctctcttgggtggtaaaagtggagctggggct
ggaattgatctctcatctctagtagttgtggagggaaaaatttgctgggatctttatatt
gattgccttgtggtttgttcagacgggaatctgcttgatgccctaggtgctgccattaag
gctgctttgagcaatacaggcatcccgagggttcaagttgcagctggtgcatcaggtgat
gagcaaccagaggttgacattagtgatgaagaatttctgcagtttgacacatcagatatc
cctgtcatagttacattaacaaaggtgggaaggcactatattgtagatgccactacagaa
gaggagtcccaaatgagctctgccatttctatttctgtcaacaggaaaggacacatttgt
gggctcaataaaagaggtggtgcaggcctggatccaagcatcgttctggacatgatatct
gtggcaaaacatgtaagtgagcagctaatgaacaaattggattctgagatagctgctgct
gaagccggtgaagatgaatcatga
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