Quercus suber (cork oak): 112003212
Help
Entry
112003212 CDS
T05868
Name
(RefSeq) exopolygalacturonase
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu00040
Pentose and glucuronate interconversions
qsu01100
Metabolic pathways
Module
qsu_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
112003212
Enzymes [BR:
qsu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
112003212
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
112003212
NCBI-ProteinID:
XP_065637023
LinkDB
All DBs
Position
Unknown
AA seq
429 aa
AA seq
DB search
MSRPFFHGKLLLVLSIYYFNGVFGREAVSVVKGIEFEAQKGRHVLHHKGRKRSALFDFDV
MSFGARADGRTDDTRAFRTAWKKACESSGSVNLLIPKGTYLIGHIEFTGPCNNVSSLTVH
LKGYLKATTDLSKYGFSAGWVEFGWVEGLTLTGGGTLDGQGAKAWPYNDCPTDSNCKLLP
TNVKFMAMNKTVVRGITSLNSKFFHIALVECKNFKGSKIKISAPSNSPNTDGIHIERSSS
VYFSGSHIGTGDDCISVGQGNSQVTITGVTCGPGHGISVGSLGRYRNEGDVSGLLVRDCT
MTGTTNGIRIKTWENSPGSSAVTNMTFENIVMNNVTNPIIIDQTYCPFTSCTSMAPSRVK
ISDIYFKNIRGTSSSKVAVALECSKGMPCQNIYLENVHLDLSSGEKHATSTCKNVRAKYI
GTQLPPPCS
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgagccggcctttcttccatggcaaattgctcttggttctgtctatctattatttcaat
ggtgtttttggcagagaagcagtgtcagttgtgaaaggcattgaatttgaggcacaaaag
ggtagacacgttttacatcacaaggggaggaaaaggtctgctttatttgattttgatgtc
atgagctttggtgctcgagcagatggccgaactgatgacactcgggccttcagaacagca
tggaagaaggcatgtgagtcctcaggctcagtgaatcttctgataccaaaagggacatac
ttgattggccacatcgagtttactggcccgtgcaataatgtatcatctctaactgttcat
ttgaagggttatttgaaagcaacaacagacttgtccaagtatggattcagtgctggttgg
gttgaatttggatgggtagaagggctaaccttgaccggaggtggaaccttagatggccaa
ggtgctaaagcctggccttacaatgactgccccactgattccaactgcaaacttcttcca
actaatgtgaaattcatggcaatgaataagacggttgtacgtggcataacttcgctgaat
agcaagttctttcacatagctctcgtggagtgcaagaacttcaaaggtagtaaaatcaag
atttcagccccatcaaacagtcctaacactgatggcattcacattgagagaagctctagt
gtctacttttctggatcacatattgggacgggtgatgactgcatctctgttggacaagga
aattctcaagtcaccatcacaggtgtcacttgtggacctggtcacggtatcagtgttgga
agtttgggaagatatcggaatgaaggagatgtaagtggacttttggttagggattgtacc
atgacaggtactacaaatggcattaggattaagacatgggaaaactctccaggtagcagt
gcagtcaccaatatgacatttgagaacattgtcatgaacaacgtgactaatcccattata
attgaccaaacatattgtcccttcacgtcttgcacttccatggcaccatctcgagtgaag
atcagtgacatatattttaagaacattagagggacttcatcatcaaaggtagcagtggca
cttgaatgcagcaaagggatgccatgtcagaacatctaccttgaaaatgttcacttggac
ctgtcatcaggggagaaacatgccacttccacttgtaaaaatgttagagctaaatacatt
gggacccaactccccccaccatgttcttag
DBGET
integrated database retrieval system