Quercus suber (cork oak): 112003316
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Entry
112003316 CDS
T05868
Name
(RefSeq) zinc finger CCCH domain-containing protein 41
KO
K13192
RNA-binding protein 26
Organism
qsu
Quercus suber (cork oak)
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
qsu01009
]
112003316
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsu03019
]
112003316
03041 Spliceosome [BR:
qsu03041
]
112003316
Protein phosphatases and associated proteins [BR:
qsu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112003316
Messenger RNA biogenesis [BR:
qsu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
112003316
Spliceosome [BR:
qsu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
112003316
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_Nup35
zf_CCCH_4
TelA
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
112003316
NCBI-ProteinID:
XP_065620812
LinkDB
All DBs
Position
Unknown
AA seq
946 aa
AA seq
DB search
MELKVSSPKPLGLSPSDCVSDPEEKEVSDDDDDDRNHKHRRRETRSQSLERDAPEHVITR
PFRRRNKPYENGHAFRDFESQASEKALYTKFERRRPGLMPLTRSPLDLNQRIRANQTFSG
DTDPGRGRGRDSGSWNQRDSRFSSVDIASQMVQQGSIPPSLYNGRGLPNVSNAQSASWSA
FGLIPGLPTGGLDTIHSIGLQGTLRPPINSSMNMGIPRQRCRDFEERGFCLRGDMCPWSM
RGHVPMEHGVNRIVIEDVQSLSQFNLPVSLPSVHLLGAPAGTGPLPSVSASSTALMNSKG
LHGKSSKPGMADDGLGLNGAFPGSGCVNGADLYDPDQPLWNNNCPETSSALLSLQSPKIH
ETDSTLNDDPSDRHLGRLCDSADNECLVRSTGTGVGSQGTSLSVWGRIGSSKNRLDVKGK
IDSMISSSDYLENEAKEDKGALASVQGTSRQGKRIIAEDVGPKAMDSSPKTPSDNMRNIR
KPSQKALRTLFVNGIPQRNNKREALLSHFQKFGEVIDIYIPANGERAFVQFSKREEAEAA
LKAPDAVMGNRFIKLWWANRDSIPDDGVSSGSSVSVTPRGVTAASASYHPSIVSKGKDIN
QPAASRSSVLHASDASVSVSDHPKPVISDAPKAPPPLQKKLDSLEQLKEELRKKQELLDQ
KRNDFRRQLQKLEKHATKGEVVAEQVAKRPKVEIVADIAKAATPRSSYDPGSAVVSPHTE
MVGDKIKLVDNVLLDSPKASTPTSLQESTNLKQPNRPLAPVGAPFLMNRYKLDNRPTGFR
IMPPLPAGLASVAVLKEHFSSYGDLSTVELEDMVVSESEASKICSACITFTTRRSAERAF
VNGKCWQDHNLKFMWLTSSNSRSDSGGSENSPSTHKGHSEPDIQPAETYSEPDVQPAETL
PSIVSEEATAAENGDPESMERKSGVEHMELGEDSQPGASPKSGEEE
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atggagctcaaagtttcatctccaaaaccactgggtctttctccttctgattgtgttagt
gatcctgaggagaaggaagtcagtgacgacgacgatgatgatcgtaaccataagcatcgt
aggcgggagacacgttctcaatctttagaaagagatgctccagagcatgtaataacaagg
ccgttcagaagacgtaacaaaccttatgaaaatgggcatgctttcagggattttgaatct
caagcaagtgagaaagccttgtatacaaagtttgaaagaagacgccctggtctaatgcca
ctcactcgatcacctttggatttgaatcaaagaattcgggcaaaccaaacattttctgga
gacactgatcctggtagaggaagaggcagggattctggatcttggaaccaacgtgattca
aggttcagctcagttgatattgcttctcaaatggttcagcaggggtcgattcctcctagc
ctatacaatggaagagggttgccaaatgtttcaaatgcacagagtgcatcttggagtgca
tttggattaattccaggactaccaactggtggcttggatacaatccattccattgggttg
cagggaactctcagaccacccatcaattcttcaatgaatatgggcattcctcgccaacgc
tgtagagattttgaggagcgtggattttgtctaagaggggacatgtgcccatggagcatg
aggggacatgtgcccatggagcatggtgtcaatcggattgtcattgaagatgtacagagt
ctttcacagtttaatcttcctgtttcacttccaagtgtgcacctattgggagcacctgct
ggaactgggcctttaccatcagttagtgcttcttcaactgctttgatgaacagcaaagga
ttgcatggaaaaagtagcaagcctggaatggccgatgatggtttgggcttgaatggtgca
tttcctggttctggttgtgtaaatggagctgatctgtatgatcctgatcaacccttgtgg
aataacaattgtcctgaaacatcaagtgccctgctttcactacaatcacctaagattcat
gaaactgactccaccttgaatgatgatccctctgatcggcatcttggcaggttatgtgac
agtgctgataatgagtgccttgttagaagcactggaactggtgttggttcacaaggtacc
agtttgtctgtttggggcagaatcggtagttcgaaaaatagattagatgtgaagggaaaa
attgattctatgataagttcctctgattatcttgagaatgaagctaaggaagataaaggg
gccttagcgagcgttcaaggcacttcccgtcaagggaagcggatcattgcagaggatgtt
ggcccaaaagctatggattcatctcccaagacaccaagtgataatatgcgtaacattcgg
aaaccttctcaaaaggcactgcgtactctatttgtcaatggcattccccagagaaacaat
aaaagagaggctcttctttctcattttcaaaaatttggagaggtaattgatatttatatt
ccagcaaatggggaacgagcttttgtccagttctctaaaagggaagaggcagaagctgct
cttaaggcacctgatgctgtaatgggtaaccgctttattaagctgtggtgggctaatcga
gatagcattccagatgatggcgtcagcagtggcagtagtgtatctgtaacaccacgcggt
gtgactgctgcttcagcttcatatcatccttccattgttagtaaaggaaaagatattaat
caacctgctgcttcaaggagtagtgttctccatgcttctgatgcttctgtatctgtctct
gatcaccctaagcctgtcatctcagatgctcctaaagccccacctcccttgcaaaagaag
ctagattctttagagcagttgaaagaagaacttcgcaagaaacaggaattgctagaccag
aagcggaacgacttccggcgccagttacaaaaacttgagaaacatgccactaagggtgag
gtagttgccgaacaagttgctaagagacctaaagtggaaatagtggctgatattgctaaa
gctgctactccaaggtcctcctatgatcctggttctgccgtggtatcacctcatactgag
atggtgggagataagataaaattggtggataatgttttgttagatagtcctaaagcaagt
acacccacatcactgcaggaatctacgaacttgaagcagccaaatcgtccattagcacca
gtaggggctccttttctgatgaatagatacaaattggataaccgtcctactggatttaga
attatgccgcctttaccagctggacttgcaagtgttgctgttttgaaggaacacttttca
tcttatggtgatctttctactgtggagctagaagatatggttgttagtgagtcagaggca
tcaaaaatttgctcagcttgtattactttcaccacacgtcgttcagctgagagagcattt
gttaatggtaaatgctggcaagaccacaatttgaaatttatgtggctgacatctagtaat
tcgaggagcgactccggtggcagtgaaaattctccgtccactcataaggggcattcagaa
cctgatatccagcctgcagaaacatattcagaacctgatgtccagcctgcagaaacatta
ccaagtattgtttccgaggaagctactgccgcagaaaatggagatcctgaaagtatggaa
agaaaaagtggtgttgagcatatggaattgggtgaagattcacagcctggtgcaagccca
aaatcaggtgaggaagagtaa
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