Quercus suber (cork oak): 112003435
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Entry
112003435 CDS
T05868
Name
(RefSeq) LOW QUALITY PROTEIN: RNA polymerase sigma factor sigC
KO
K03093
RNA polymerase sigma-I factor
Organism
qsu
Quercus suber (cork oak)
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qsu03021
]
112003435
Transcription machinery [BR:
qsu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
112003435
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Motif
Other DBs
NCBI-GeneID:
112003435
NCBI-ProteinID:
XP_065628806
LinkDB
All DBs
Position
Unknown
AA seq
572 aa
AA seq
DB search
MGFGFRLNLKWGFPIQSHSLTNSPSRLSSSYVRGKEASLNLTRQSFVSVISEESETFYKD
PLKADICSAAAPLFTENNFSEVEDMKKNIRKRSYSSLRNMIDDTQVPVEEGKFTSCTSLQ
GGKEANFNLLIENLHVLEETFVDSDVLRLERDIMQQLGRLGAINLFNTCLSRTVQNSNLL
DLSDIPTDYTEHEKKSKTDEHAEDEMKGKTDDCIGKVVVRSRKKREENXRGKKTLENACE
TSLLLLPSKIIQQRFGQPNVSSAKRASSSRSRRLKISRNEAEMSTGVKVVANLERIRRTL
EEETGRVATISCWAEAAGLDEKVLQQNLHFGWYCRDEIIRSTRSLVLYLARNYRGLGIAL
EDLIQAGNLGVLQGAERFDHTRGYRFSTYVQYWIRKSMSRMVAQHARGIQIPYTLCSAIN
QIQKAKTALNSGHKKYPDDDEIAKHTGLSLAKIRSASKCLRVVGSIDQKMGHCINIKYME
VTPDMSVKSPEETVMRQHMIKDIRDLLRGLDSRERQALFLRFGLQDNQPKSLEESGRLLC
VTKEWMRKIEKKALTKLRDEDICRNLSHYLDL
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgggtttcggtttcaggctaaatctcaagtggggttttcctattcagtctcattccctc
accaattcaccctccagactttcttcatcttatgttagaggcaaggaggcttctctcaac
ttgacaaggcagtcttttgtgtctgttatttctgaggagagtgagacattttataaagat
cctctgaaagcagacatttgttcagctgcagctccactcttcacggagaataatttctca
gaagtggaagacatgaagaaaaacattaggaagaggtcatacagtagtctacgtaacatg
atcgatgatacccaggtacctgttgaagagggcaaatttacttcctgcacaagcttacaa
gggggcaaggaagcaaattttaatttgttaattgaaaatcttcacgttttagaggaaact
ttcgttgattcagatgtgctaaggttggaaagagatattatgcagcaactaggaaggctt
ggagctataaacttattcaatacctgtctatcaagaacggttcaaaactcaaatctattg
gatttgtctgacatacctactgattatacagagcacgagaagaaaagcaaaacagacgag
catgcagaagatgagatgaaaggcaaaacggatgattgcataggtaaagttgttgttcgc
tccaggaaaaagagggaagaaaatncaagaggaaaaaaaacattggaaaatgcctgtgaa
acttctcttctgttattgccttcaaaaatcattcagcaacgttttggacagcctaatgtt
tcatctgcaaaaagggcatcaagttctagaagtagaaggcttaagatttctaggaatgag
gctgaaatgtcaacaggtgttaaggtggttgcaaacttggagagaatcagaagaactttg
gaagaggaaactggtcgagtagccaccataagttgctgggcagaagcagccggacttgat
gaaaaggtgctgcagcagaatttgcattttggttggtattgcagggatgagattataagg
agtactcgctccttagttctataccttgcaagaaactatagaggcctgggaatagccttg
gaagatttaattcaggctggaaatctgggagtgctccaaggtgctgaaaggtttgatcat
actaggggttaccgattttcaacctatgtccagtattggataaggaaatcaatgtcaaga
atggtagcacagcatgccaggggaattcaaattccttacacattgtgcagtgcaataaat
cagatacagaaagctaaaacagcccttaacagtggccacaagaaatacccagatgatgat
gaaattgcaaagcacacaggtctttctttggctaaaattagatcggctagcaaatgctta
agagttgtgggttcaattgatcagaagatgggacattgcatcaatataaaatatatggaa
gttacacctgatatgtcggtaaagagcccggaagaaactgtcatgaggcaacacatgata
aaagacattcgtgatcttttgagaggcttggattcaagagagaggcaagcgttgttccta
cggtttggtcttcaggacaatcagcctaaatcacttgaggaatctgggaggcttctttgt
gtgaccaaggagtggatgcggaaaattgaaaagaaggctctaacaaagctaagggatgaa
gatatctgcagaaatttaagccattatttggatttgtag
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integrated database retrieval system
