Quercus suber (cork oak): 112003493
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Entry
112003493 CDS
T05868
Name
(RefSeq) plant-specific TFIIB-related protein 1
KO
K03124
transcription initiation factor TFIIB
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
112003493
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qsu03021
]
112003493
Transcription machinery [BR:
qsu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
112003493
Prokaryotic type
Archaeal type
TFB
112003493
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
HTH_Mga
Motif
Other DBs
NCBI-GeneID:
112003493
NCBI-ProteinID:
XP_023891473
LinkDB
All DBs
Position
Unknown
AA seq
877 aa
AA seq
DB search
MKCPYCPSAQVRCATTSSGRSITECASCGHVIEERQSQPHHLFHLRFQDNPLCLVTSDLP
SHLENDENDPFEPTGFITAFSTWSIEPNPLFLRSSLSFSGHLAELERTLESSSSSSSSST
VVVDNLRAYMQIIDVASILGLEYEISDHAFQLFRDCCSATCLRNRSVEALATAALVQAIR
EAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTLLQLNKS
AQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTEVTLRK
VYKELLENWDDLLPSNYTPAVPPERAFPTTVIASGRSSAPKGDLVEGNSSLEREKLQEIK
VNKPDEVPDMGHQARVKEEAESRGNSQGPSNPVLNQPPAFWQAQATIGASGPRGDNNQNI
TQGTDINELHSNSQELEQKVDKDANGATNSLKPNQLSSPPTSSGGSVMHVWSPYMSQPPN
IPVVKPPKVERDSNQNITRGTDINRLHSNHQELEHRVDKDASGTDSLKPNQLSSPPTSSA
SSVTQVWSSYMSLPLNIPVVKPLNVEGDNNQNITRGTDINQLHSHQDLEYRVDKGANGAT
NSLKPIQLSSPPTSSASSVMQAWSSYMSEPLHIPPNVVRDNHQGTDINRLHSKHQVLEHK
VVKGANGATNSLKPNQLSSSPTLNVSSIRHQYWSPYMPKPQSIPCQNITGGTDINELHSI
RQELGHNIVDEDANGATNSLKPNQLSSSAISSENSVMQVWSSYMSQPLNIPAVNVVRDNN
QNITRGTNINQLHSNRQELEHKVDKGANGATNSLKPNQLSSPPTSSSGSVGQYWSPYMSR
PLNVPVVQTPNVVPGYAEPKRSGSLNGSRSANQCGDK
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgcccatactgcccgtcggcgcaggtgcggtgcgccaccacgagctcaggccgg
tcgataacggagtgcgcctcctgcggccacgtcatagaggagcgtcaatcccagcctcac
cacctcttccacctccgcttccaagacaaccctctctgcctcgtcacctccgacctcccc
tcccacctcgaaaacgacgagaacgacccgttcgagcccaccggcttcatcaccgccttc
tctacctggtccatcgagcccaaccccctcttcctccgctcctctctctccttctccggc
cacctcgccgagctcgagcgaactctcgaatcttcttcttcgtcctcttcgtcgtcgacc
gtcgtggtcgataatctcagggcgtacatgcagattatcgacgtggcgtcgattctcggg
ttggagtacgagatatcggaccacgcgtttcagctatttagggattgttgctccgctact
tgtttgaggaatcggagcgtggaggcactcgccactgctgcgcttgtccaagccattagg
gaggcccaagagcccagaacactccaggaaatttcaattgcagccaatgtacctcagaag
gagattgggaagtacatcaagatacttggtgaagcgctacaactaagtcagcccattaac
agcaattccatatcagtccacatgccacggttttgcacgcttctccaactcaacaaatct
gctcaggagcttgcaactcacattggagaagttgttattaataagtgcttctgcactcgg
aggaaccccataagcatatctgctgccgctatttatttggcctgccaactagaagacaaa
cgcaaaacccaggcagagatttgtaaggtgacaggcctcactgaggtcaccctccgtaag
gtctacaaggagttgttagagaattgggatgacctactcccatctaattatactccagct
gttcctccagagagagcatttcccacaactgtgattgcttcaggtcgttcttcagcccct
aaaggtgatttagttgaagggaattcttcattggagagagaaaagctgcaggaaattaaa
gttaataaaccagacgaggttccagacatgggtcatcaggctagagtaaaagaggaagct
gaaagtagaggtaactctcaagggccctctaacccagtgttgaaccaaccacctgcattt
tggcaagctcaggctacaattggagcttctggtcctaggggagacaacaatcagaatatc
acacaaggaacagacatcaatgaactgcactctaacagtcaagagttagagcaaaaagta
gataaggatgcaaatggtgctactaattccctaaagcctaaccagctttcaagtccccca
acttcaagtgggggttcagtcatgcatgtttggtctccttatatgtctcagcctcccaat
attccagttgttaagccaccaaaggtagagcgagactccaatcagaatatcactcgagga
acagacatcaatcgactgcactctaaccatcaagagttagagcacagggtagataaggat
gcaagtggtactgattccctaaagccaaaccagctttcaagtcccccaacttcaagtgca
agttctgtcacgcaggtttggtcctcatatatgtctctgcctctaaatattccagttgtt
aagccactaaatgtagagggagacaacaatcagaatatcactcgaggaacagacatcaat
caactgcactctcatcaagatttagagtacagggtggataagggcgcaaatggtgctact
aattccctgaagccaatccagctttcaagtcccccaacttcaagtgcgagttcagtcatg
caggcttggtcctcgtatatgtctgagcccctacatattccaccaaatgtagtgcgagac
aaccatcaaggaacagacatcaatcgactgcactctaaacatcaagtgttagagcacaag
gttgttaagggtgcaaatggtgctactaattccctaaagccaaaccagctttcaagttcc
ccaacattaaatgtgagttcaatccgtcatcagtattggtccccatatatgcccaagcct
caaagcattccttgtcagaatatcactggaggaacagacatcaatgaactgcactctatt
cgtcaagagttagggcacaacatagtagatgaggatgcaaatggtgctactaattcctta
aagccaaaccagctttcaagttccgcaatttcaagtgagaattcagtcatgcaggtttgg
tcctcatatatgtctcagcctctaaatattccagctgttaatgtagtacgagacaacaat
cagaacatcactcgaggaacaaacatcaatcaactgcactctaaccgtcaagagttagag
cacaaggtagataagggagcaaatggtgctactaattcccttaagccaaaccagctttca
agtcccccaacttcaagttcaggttcggtcgggcagtattggtccccgtatatgtctagg
cccctaaatgttccagttgttcagacaccaaatgtagtgccaggttatgctgaacccaaa
agatcagggagtctaaatggaagcagaagtgccaatcagtgtggggataaatag
DBGET
integrated database retrieval system
