Quercus suber (cork oak): 112003759
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Entry
112003759 CDS
T05868
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC112003759
KO
K14794
ribosomal RNA-processing protein 12
Organism
qsu
Quercus suber (cork oak)
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
qsu03009
]
112003759
Ribosome biogenesis [BR:
qsu03009
]
Eukaryotic type
90S particles
Other 90S particles
112003759
Pre-60S particles
Other pre-60S particles
112003759
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP12_HEAT
Motif
Other DBs
NCBI-GeneID:
112003759
NCBI-ProteinID:
XP_065616164
LinkDB
All DBs
Position
Unknown
AA seq
1454 aa
AA seq
DB search
MPEPEEQEEELLKDGSDICQQLMDRYARSSAPQHRHLLATAAAMRSILTSESLPLTPRAY
FAAAIDTAASNSDTLDSTAAAALLSFLSVVLPLVPAQEISAEKAGEAVSVLVNLVGKERG
SDGGLAVATVKAVVKCLGILLGFCDLENWDSLKLGFQTLLDFSIDRRPKVRRCAQDCLVK
AFKSFKSSGVNKAASKLVLSMLKNNMPLAVKLSSLKAVDGSKDDTLSKPEHLEVLYMLSV
VKISVPSLSTKVSSKVISEIVKLLNSKFSVLTRHVFQVIEAFFETLRVEVTVPETEKIVD
LLVSYVSSGDKNPVDTDISAATLLKRALDILHDRESSLWIRNLPLVCGCLAGLLSSEASI
ASLASXILKELLSHLADYKTLLTDKDKPSDDEGQESMEASAIKSVCLIFENALATYSGTP
DEHILGVITVLFLNLGEISYVFMKSIVLKLADLMILANGGTSNTDHVTSECIGSAVIAMG
PERILTLLPISLHGXLDLLNIWLIPILKDYVVXSSLGYYIENVVPLAKSFERASRKGISS
KNTGNLYPLFQFFFHNPLSHCFIEIRVGVVSVSLSACCMCYHFQYLSIVTPFIKFAEKDC
VLQFRNVPTYSKKIATKNIKALTSCSTELLQALTNLFVDSLPEKRSYLKDAIGCLASITD
SSITKMILMSLFERFQFVDGEGEFEKLGSDNQAMIDKEQGNLSSTEKEIQRCVIMELVSS
FVEGAKEDVIDLIYKFIRHTFEVTNKSGHCEAYHALSRILEEHAWFSSSRFVELIDLLLG
LKSPVDIASLRSRFASLHILMIHALKMRLEEENTKAFLILNEIILTLKEGNEEFRKSAYD
ILLKISASLKDSSAISDAPYHKLIGMIMGYLSGSSPHIKSGAVSALSVLVYQDADICLSM
PDIVPSLLSLLHTKVVEIIKAVLGFVKVLVSCLQAKDLHRLLSDVVYEVLPWSSVSRHHF
RSKVIVIMEIIIRKCGSAVVESVTPDKYKSFLKTVFEVILSFPVLSSFLNIVYFNFREGL
DHPIVLVPALVVLHLWYVTYVQLSCYSTCNSDLDTCAGVLMRLEEENTKAFLILNEIILT
LKEFYVFLIFFCMHVVVGGCDLIPSFLLMNVHFCCRLFEGNEEFRKSAYDILLKISASLK
DSSAISDAPYHKLIGMIMGYLSGSSPHIKSGAVSALSVLVYQDADICLSMPDIVPSLLSL
LHTKVVEIIKAVLGFVKVLVSCLQAKDLHRLLSDVVYEVLPWSSVSRHHFRSKVIVIMEI
IIRKCGSAVVESVTPDKYKSFLKTVFENRHGRTSSKESDAGDTEMMLADTSMKASESMLE
KRKHKAMSSIPEENGSVEQRKRKREKKTNAYARIPSSNEHHPSSGSGGGLRAVQSARLSH
NAKSMKGQSEGRQKKSKRNHDQIMKNHEKRKEPTNTSKKDEATHIPNDSKLSRHKVGRKR
QKINKLVTMCTKSE
NT seq
4365 nt
NT seq
+upstream
nt +downstream
nt
atgccagaaccagaagaacaagaggaggagcttttgaaagatggctccgacatctgccaa
cagctcatggaccgttacgccaggtcctccgccccgcagcaccgccacctcctcgcaacg
gccgccgccatgcgttccatcctcacctccgagtccctccccctcaccccgcgcgcctac
ttcgccgctgccatcgacaccgctgcttccaattccgacacgcttgactccaccgctgcc
gccgcgctgttgtcatttctgtccgtcgtgcttccgctggtgccagcgcaggaaatcagc
gcagagaaggcgggcgaagcggtgtccgtgctggtcaatttggttgggaaggagagaggg
agcgatggaggcttggctgtggccactgtgaaggctgtggtcaagtgtttaggaattttg
ttagggttttgtgacttggagaattgggattctctcaaattagggttccaaactctcctt
gatttctcaattgatcgccgtcccaaggttaggagatgtgctcaagattgtcttgtgaag
gcttttaagtcttttaaaagctcgggtgtaaacaaggccgcgagcaagttggtactgtct
atgctcaaaaacaacatgcctttggcagttaaattaagtagtttgaaggctgtagatggg
tctaaagatgatacattgtcgaagcctgaacatttggaggttctttatatgcttagtgta
gtgaagattagtgttccgagtctttctacaaaagttagttcaaaagtaatctcagaaata
gtgaagcttctgaattccaagttctcggtgcttacaagacatgtttttcaagttattgaa
gcgttttttgaaacattgagagttgaagttactgttccagagacagagaaaattgtagat
ttgcttgtatcgtatgtgtcttcgggagataagaaccctgtggacactgatatttctgca
gcaacattgttaaaacgtgctctggatatacttcatgatagagaatcaagcttgtggatt
aggaatcttcctctagtttgtggctgtttagcaggtcttctaagttcagaggctagcatt
gcatcattggcttcangtattttgaaagagttgctcagccatcttgcggattataaaact
ctcttgactgataaagataaaccatctgatgatgaaggtcaggagagcatggaagcaagt
gcaataaaatcagtttgtcttatctttgagaatgcccttgccacttatagtggaactcca
gatgagcatattttgggggtcataactgttttgtttctcaatcttggagaaatctcatat
gtctttatgaagagtatagtgcttaaacttgcggacttgatgatccttgccaatgggggc
acatccaacactgaccatgtaacttcggaatgtattgggtctgctgtaattgctatggga
ccagagcggatacttacacttttacctatctccctacatgggnnacttgacttgttgaac
atttggttgatacctattttaaaagattatgttgttngaagctcactagggtactatatt
gagaatgttgtgccccttgctaaatcatttgagcgggctagtcgtaaaggtatttcctca
aaaaatacagggaatctctatcctttatttcaatttttttttcacaatcctctctctcat
tgcttcattgaaatcagagtaggagttgtcagtgtgagtctttctgcatgttgtatgtgc
tatcacttccaatatctatccattgtaacaccttttatcaaatttgcagaaaaagattgt
gtgttacagttcagaaatgtacccacttactcaaagaagattgcaaccaaaaacatcaag
gccttgacatcatgttccacagagttgctccaggctctaacgaacttatttgttgattca
cttcctgagaagcgctcgtatctaaaggatgccattggatgcctggcttctattactgat
tcttctataactaaaatgattctcatgtcattattcgagaggtttcagttcgtagatggt
gagggtgaatttgaaaagttggggagtgataaccaagcaatgattgataaagaacaaggc
aatctaagtagtacagagaaagagattcagaggtgtgtgataatggagctagtatcttct
tttgttgaaggagccaaggaggatgttattgatctaatctataaatttattagacacact
tttgaggtaactaataagtctggtcattgtgaagcataccacgccttgagcagaattctg
gaggaacatgcctggttttcttcttcccgatttgttgagctgattgatttgttacttggt
cttaagtctcctgttgatattgcctctcttaggagtcgctttgctagtctccatatatta
atgattcatgcattgaagatgaggttggaggaggagaacacaaaggcttttcttattctc
aatgagattatactcacattaaaggagggaaacgaagaattcaggaaatctgcttatgat
attctccttaagataagtgccagcttgaaagactcatcagctatttctgatgcaccttat
cacaaactgattggcatgataatgggctatctttctggttcatctcctcatataaagagt
ggggctgtgtctgccctgtcagtattagtttatcaggatgcagatatctgtctttcaatg
cctgatattgtcccctcacttttatctttgctgcataccaaagtggtggaaattataaaa
gctgttttgggtttcgtgaaagtactagtgtcatgcttacaagccaaagacctacacagg
cttctgtctgatgttgtctatgaagttttaccatggtcatctgtctccagacatcatttt
agatcaaaggtcattgtcataatggagataataatacggaagtgtggttctgcagtagtt
gagtcagttactccagataaatataagagttttctgaagaccgtttttgaggtgattctt
tcatttcctgttttaagctcatttttaaatatagtttattttaattttagagagggactt
gatcatccaattgttttggtaccagctctcgttgttttgcacttgtggtatgtgacctat
gttcaattatcatgctattccacttgcaattcagaccttgacacctgtgctggtgttctt
atgaggttggaggaggagaacacaaaggcttttcttattctcaatgagattatactcaca
ttaaaggagttttatgttttcttaattttcttttgtatgcatgttgtagtgggaggctgt
gatctaattccatctttccttttgatgaatgtacatttctgttgtcgactttttgaagga
aacgaagaattcaggaaatctgcttatgatattctccttaagataagtgccagcttgaaa
gactcatcagctatttctgatgcaccttatcacaaactgattggcatgataatgggctat
ctttctggttcatctcctcatataaagagtggggctgtgtctgccctgtcagtattagtt
tatcaggatgcagatatctgtctttcaatgcctgatattgtcccctcacttttatctttg
ctgcataccaaagtggtggaaattataaaagctgttttgggtttcgtgaaagtactagtg
tcatgcttacaagccaaagacctacacaggcttctgtctgatgttgtctatgaagtttta
ccatggtcatctgtctccagacatcattttagatcaaaggtcattgtcataatggagata
ataatacggaagtgtggttctgcagtagttgagtcagttactccagataaatataagagt
tttctgaagaccgtttttgagaaccgccatggcagaacgagttccaaagaatctgatgct
ggtgatacagaaatgatgcttgcagatacatctatgaaggcttctgaatccatgctggag
aagaggaaacacaaagcaatgagttctatacctgaggagaatggttcagtagaacaaagg
aagagaaagagagagaagaaaaccaatgcctatgcccgcatccctagctcaaatgagcat
cacccgtcatctggtagtggtggtggtttaagagcagttcaaagtgctaggctatctcat
aatgcaaaatcaatgaagggtcagtcagaaggaagacaaaagaagagcaagaggaatcat
gaccaaattatgaaaaatcatgaaaagagaaaggagccaactaacacaagcaagaaagat
gaagcaactcatatacctaatgattccaaattaagcagacacaaggtcgggaggaaaaga
cagaagattaataaattagtaacgatgtgcacaaagtctgaatag
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