Quercus suber (cork oak): 112003828
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Entry
112003828 CDS
T05868
Name
(RefSeq) nuclear pore complex protein NUP98B
KO
K14295
nuclear pore complex protein Nup50
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112003828
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsu03019
]
112003828
Messenger RNA biogenesis [BR:
qsu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
112003828
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ran_BP1
TcaA_2nd
Motif
Other DBs
NCBI-GeneID:
112003828
NCBI-ProteinID:
XP_065625321
LinkDB
All DBs
Position
Unknown
AA seq
443 aa
AA seq
DB search
MKGTKRFAVSDSIPDTNDTAFRNKRVMEGSSADVHRAEPSQQLMTTPPLDMQRAKSSCQH
VRALNTQFASWVQAQLKNHPDELWEDGVRDYLAHASNIMEKFSDVVNWLKANATKGGSSS
AAESQTKENKMFNETKNSGIKLSQEKAAVTLAGTSSSFGTPWSSGLLFNNQSTGFPPAST
TTLSATSFSSGAFSNSQTPGSIPGTTTAFANSFSSGALSNSQSPGSTPASTTTAFATSLS
SGLFSNNQAPGFIPASTTASFPNLWSSGVFSNNQTPVSFGGYIFYSSAWGWVGGGDDADG
ENELEQPSSPSVKKSEEKGIVVVHEVKCKLYVKSSDPADKDAWKDKGMGQLSIKCKEGVD
KGTKESKPTIIVRNDVGKLLLNALLYPGIKTNLQKNSVVAIFHTSGDNDGSDKVVARTFL
IRTKTEEDRNKLATAMQEYAPAS
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgaaagggacgaaacgttttgccgtgtccgactccattcccgacacgaacgacacggct
ttccgtaataaaagagtgatggaaggatctagtgctgatgttcatagggcagagccatct
cagcagttgatgacgacacctccattggatatgcaacgggctaagtcatcttgtcagcat
gtgagagctctcaatacccagtttgcaagttgggtccaagcacaattgaagaaccaccct
gatgaactttgggaagatggtgtccgggactaccttgctcatgcttcaaacattatggag
aagttcagtgatgttgtcaactggctcaaagcaaatgcaaccaagggaggtagctcttct
gctgcagaatctcaaaccaaggaaaataaaatgtttaatgaaaccaagaatagtgggata
aagttatctcaagagaaagctgccgtaactctagcgggtacctcttcaagctttggaaca
ccatggagttctggacttttattcaataaccaatctactgggtttcctccagcaagcaca
actacactatcagcaacttcatttagctctggagcattttcaaacagtcaaacccctgga
tctattccaggcacaaccactgcctttgcaaattcatttagctctggagctctttcaaat
agtcaaagccctggatctactccagcaagcacaaccacagcctttgcaacttcattgagc
tctggattattttcaaacaatcaagcccctggatttattccagcgagtacaactgcaagc
tttccaaatttatggagctctggagttttttcaaacaatcagactcctgtctcttttggt
gggtatattttttactctagtgcatgggggtgggttggggggggngatgatgcagatggt
gaaaatgagttggagcagcctagcagcccatcagtaaaaaagtctgaggagaagggaata
gttgttgttcatgaagtcaagtgcaagctttatgtgaagtcaagtgatccggcagataaa
gatgcatggaaagacaaaggcatggggcaactttccatcaaatgcaaagagggtgtcgac
aagggtacaaaagaatccaaaccaacaataattgttagaaatgatgttgggaaactgctg
cttaatgctttgctataccctggcatcaagacaaatttgcagaagaattccgttgttgca
atattccatacttcgggtgataatgatggaagtgataaagttgttgcacgaaccttctta
attaggacaaaaacggaggaagatcgaaataagctggctacagcaatgcaagaatatgcc
cctgcatcatga
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