Quercus suber (cork oak): 112004004
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Entry
112004004 CDS
T05868
Name
(RefSeq) LOW QUALITY PROTEIN: putative pectate lyase 2
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu00040
Pentose and glucuronate interconversions
qsu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
112004004
Enzymes [BR:
qsu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
112004004
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
112004004
NCBI-ProteinID:
XP_065634402
LinkDB
All DBs
Position
Unknown
AA seq
393 aa
AA seq
DB search
MASLSLLLLLLSCSLTHIASISEANYSPTTNSLSTNKITNVIDACWRTKSNWASNRGALA
DCAVGYGKDAIGGKYGAIYVVTTAEDDPVNPKPGTLRYGVIQTQPLWIIFAKDMVITLKN
ELIMNSYKTIDGRGAKVKIAYGPCITVQGVSHVIIHGISIHDCKPGKSGLVRSSPTHVGH
RRGSDGDAISIFASSYVWVDHCFLSHCTDGLIDIIHASTAITISNNYFSQHNKVMLLGHN
DNFTADKIMRITIAFNHFGVGLVQRMPRIRFGYAHVANNKYEEWRMYAIGGSSNPTIFSE
GNYFVAASNLRFSNRXQNEQDVTKREASNGWKNWKWRSSKDVFLNGAYFVQSGWGNCDPY
YSQAQSFVVANGLMVPALTSSAGPLKCAYGKAC
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggcctccctatcccttctcttactattgctttcatgttctctaacacacattgcttca
atctcagaagcaaattactcccccactactaattccttgtccacaaacaaaattactaat
gtaatagacgcatgttggcgcaccaaatcaaattgggcctcaaaccgcggtgctttagca
gattgtgctgtaggctatggcaaagatgcaataggagggaaatatggtgcaatatacgta
gtcacaacagctgaagatgaccctgtaaatccaaaacctggcacacttcgatatggtgtt
atccaaacacaacctctttggatcatttttgccaaggacatggtcattacactcaagaat
gagctcattatgaatagttacaagaccatagatggaagaggagctaaagttaagattgca
tacgggccatgcataacagtgcaaggtgttagccatgttataatacatgggattagtatt
catgattgtaagccagggaaatctggacttgttaggagtagtccaacacatgttggacat
cgtcgaggctcagatggagatgccatttccatatttgcatcttcatatgtttgggttgac
cattgctttctttcccattgcactgatggccttattgacataattcatgcttcaactgcc
atcacaatctccaacaactacttctcccagcataataaagtgatgctacttggacacaat
gataatttcactgcagataaaattatgagaattacaatagcctttaaccattttggcgtt
ggccttgtacaaaggatgcctaggatcaggtttggatatgcccatgtagccaacaataaa
tatgaagagtggcgtatgtatgctattggtggcagttctaatccaaccatcttcagtgaa
ggaaactattttgtagcagcttctaatcttcgcttttcaaacaggtaacaaaatgagcaa
gatgttaccaagagagaagcaagcaatggatggaagaattggaaatggaggtcttcaaag
gatgtatttctcaatggtgcttattttgttcaatctgggtggggaaattgcgatccatac
tactctcaagctcaatcatttgtggttgctaatggattaatggtgcctgctctgacttct
agtgctggtcctttgaaatgtgcatatggtaaagcttgttaa
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