Quercus suber (cork oak): 112004304
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Entry
112004304 CDS
T05868
Name
(RefSeq) NF-X1-type zinc finger protein NFXL1
KO
K12236
transcriptional repressor NF-X1
Organism
qsu
Quercus suber (cork oak)
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
qsu03000
]
112004304
04121 Ubiquitin system [BR:
qsu04121
]
112004304
Transcription factors [BR:
qsu03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
112004304
Ubiquitin system [BR:
qsu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
112004304
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-NF-X1
R3H
NCBP3
Motif
Other DBs
NCBI-GeneID:
112004304
NCBI-ProteinID:
XP_023892299
LinkDB
All DBs
Position
Unknown
AA seq
1112 aa
AA seq
DB search
MSSQAPNDRRDHRTRFPAQAARHQWIPRGSTATTVVNQNQNQNPNPSPIPIPNPNPPLRF
SYNYRNGGDFNSSSAPPESRAGGNNVSRGRGYVGYRPLNQRKDRESQAGKGLKDLNLPQL
VQEIQEKLTKGTVECMICYDMVRRSAPIWSCSSCYSIFHLVCIKKWARAPTSVDLSAEKS
QGFNWRCPGCQSVQLTSLKEIRYICFCGKRPDPPSDLYLTPHSCGEPCGKPLERELGARE
SKEDICPHNCVLQCHPGPCPPCKAFAPPRLCPCGKKTITTRCSDRKSVLTCGQRCDKLLE
CERHRCERTCHVGSCDPCQVSVSASCFCKKKTEVVLCGDMSVKGEVKTEEGLFSCNSTCG
NKLTCGNHACYEVCHPGSCGECDLMPSRVNTCYCGKTSLQEERQSCLDPIPTCSKKCDKL
LPCRMHNCTESCHAGDCPPCLVRVSQKCRCGSTSRIVECYKTVMEEKFTCDKPCGRKKNC
GRHRCSERCCPLSNSNNFLTGDWDPHTCSIPCGKKLRCGRHSCQSLCHSGHCPPCLETIF
TDWSCACGRTSIPPPLPCGTPHPTCQLPCSVPQPCGHPSSHSCHFGDCPPCTVPIAKECI
GGHVVLRNIPCGSKDIRCNQLCGKTRQCGLHACGRTCHASPCDSSPGPEPGLKTSCGQTC
GAPRRDCRHTCKSPCHPSSLCPDERCDFPVTITCSCGRITATVPCDAGGNIGGFSADTLY
EASIIQKLPVPLQPVEASGKKIPLGQRKLMCDDECAKLERKRVLADAFDVNSNLDALHFG
ENPAVSEILTDLYRRDPKWVLSVEERCKFLVLGKSRGTTSSLKVHVFCPMLKDKRDAVRL
IADRWKLAIYSAGREPKRFIVVHVTPKSKPPPRVIGVKGSTNISTPHSPAFDPLVDMDPR
LVVSFLDLPRDSDISALVLRFGGECELVWLNDKNALAVFSDPARAATAMRRLDHGSVYQG
AVVVIPNGGAVAASSATSAWGGASTAKEGGLAAAMKGNPWKKVVVQEPGWKEDLWGDEEW
PGDNADLHASAWKKEAPIAATLNRWSVLDSETSLSSSAAPLRIEDPGKQAASHSGPMLES
DASGSNSAGQHQDNFSGTEMSEVVDDWEKAFE
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atgagctctcaagctccaaatgatagaagggatcataggactagatttcctgcccaggct
gctcgtcaccagtggatccctagaggatccacggccaccactgttgtgaaccaaaaccag
aaccagaacccaaacccaagcccaatcccaatcccgaatccaaacccaccattgcgcttc
agttacaactacagaaatggtggggacttcaactctagttctgctccacccgagagtcgg
gctggagggaataacgtttcaaggggaaggggatacgtgggttatcggcctttgaatcag
agaaaggatagggagagtcaggcggggaagggattgaaggacttgaatttacctcagctt
gtgcaagaaattcaggagaagctgacgaagggcaccgtggagtgcatgatttgctatgac
atggtgcggaggtcagcacccatttggtcttgctcaagctgttactctatttttcatctg
gtttgtatcaagaaatgggctcgggcgcctacttctgttgacttgtctgcggagaagagt
cagggatttaattggcggtgtcctggatgtcagtcggtgcagcttacatcgctgaaggag
attcggtatatttgcttttgtgggaagaggccagacccaccttctgatttgtatttgact
ccacattcatgtggagaaccatgtggcaagccacttgaaagggaactaggtgctcgtgag
agtaaggaggatatttgcccacataattgtgttttgcaatgccatccaggtccgtgccct
ccttgtaaagcttttgccccgccccgtttatgtccttgtgggaagaaaacaattacaaca
cggtgctctgatcggaagtctgttcttacttgtggtcagcgttgtgacaagcttcttgaa
tgtgagcgtcataggtgtgagcggacctgccatgtgggttcttgtgatccatgtcaggtt
tcagtcagtgcctcttgtttctgcaagaagaagacggaggttgttctttgtggggacatg
tctgtgaagggagaggtgaaaacagaggagggtcttttttcttgtaattcaacttgtgga
aataagcttacatgtggtaatcatgcctgctatgaagtttgtcatcctggatcttgtgga
gagtgtgacttgatgccgagcagggttaatacatgctattgtgggaaaacaagtttgcag
gaggaacgacagagctgtttggacccaattccaacctgttctaaaaaatgtgacaagctc
cttccttgtaggatgcataattgtacagagtcatgccatgcaggggattgcccaccatgt
ttggttagagtttctcaaaaatgccgttgtggatcaacttctcgaattgtggaatgctac
aaaacagtgatggaggagaaatttacttgtgataagccttgtggacggaagaagaattgt
ggaaggcacaggtgcagtgagcggtgctgcccgctctctaattctaacaattttctcact
ggggattgggatccacacacttgctcaatcccatgtgggaagaagctaaggtgtgggcgg
cattcttgtcaatcactttgtcacagtggccattgccctccttgccttgaaacaatcttc
actgattggtcatgtgcttgcgggagaacttcaatccctcctccattgccttgtggcaca
cctcatcctacatgtcaactcccgtgttcagttcctcagccttgtggccatccatcttct
cacagctgccactttggagactgcccaccttgtacagtgcctatagctaaggaatgcatt
ggtggacatgttgtacttaggaacataccttgtgggtctaaggatatcagatgtaaccag
ctctgtgggaagaccaggcagtgtggactgcatgcttgtggcagaacttgtcatgcatca
ccttgtgattcttctcctggacctgaaccaggtttaaaaacttcttgtgggcagacatgt
ggtgctcctaggagagattgtaggcatacatgtaaatcaccttgtcacccatcttctctt
tgtcctgatgaaagatgtgatttccctgtcacaatcacttgttcttgtggccggataaca
gcaactgttccttgtgatgctggaggcaacattggtggtttcagtgctgatactttatat
gaagcttccattatccaaaagttgccagtgccacttcagccagtggaagcatctggcaag
aaaatcccacttggacaaaggaagctcatgtgtgatgatgaatgtgctaagttggaacgt
aaacgggttctagcagatgcctttgatgttaattcaaacttggatgcccttcattttgga
gagaacccagctgtttctgaaattcttacagacctctataggcgtgatccaaagtgggta
ttgtctgtggaggagagatgtaagttcttggtacttggcaagagcagaggaactacaagt
agtcttaaggttcatgttttttgtccaatgcttaaggataagagagatgcggtaaggttg
attgccgacaggtggaaacttgctatttattctgcaggtcgggagccaaagcgttttatt
gtggttcatgttacacccaaatcaaaaccccctcctcgtgtgattggggttaagggttcc
accaacataagcacaccccattccccagcttttgatccgttggtagacatggatcccaga
ctcgttgtttcttttcttgatttgccaagagattcagatataagtgcattggtcctgagg
tttggtggggaatgtgaactagtttggctgaatgacaagaatgcattggccgtatttagt
gatcctgctcgagctgcaactgctatgagaagattggatcatgggtcagtatatcaagga
gctgttgtggttatcccaaatggtggtgcagtagcggcatcatcagctactagtgcatgg
ggaggagccagtacagccaaggaagggggattagcggcggctatgaagggtaacccatgg
aagaaggttgttgttcaggagcctggttggaaggaagatttatggggtgatgaagagtgg
cctggtgacaatgcagatttgcatgcatctgcatggaagaaagaagctccaattgctgct
acgctaaatcggtggagtgttctagactctgaaacgtctttgagttcatctgctgcacct
ctcagaatagaggatcctggaaaacaggctgcaagtcattcaggtccaatgctggaatct
gatgcaagtggttcaaattcagcagggcagcatcaagataattttagtggaacagaaatg
tctgaggtggtagatgactgggagaaggcttttgagtga
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integrated database retrieval system
