Quercus suber (cork oak): 112004773
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Entry
112004773 CDS
T05868
Name
(RefSeq) LOW QUALITY PROTEIN: autophagy-related protein 18a
KO
K22991
WD repeat-containing protein 45
Organism
qsu
Quercus suber (cork oak)
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
qsu04131
]
112004773
Membrane trafficking [BR:
qsu04131
]
Autophagy
Other autophagy associated proteins
Others
112004773
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROPPIN
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_IFT140_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
WDR55
Beta-prop_Vps41
BCAS3_WD40
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Ge1_WD40
Beta-prop_TEP1_2nd
Beta-prop_IFT80_2nd
Izumo-Ig
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
112004773
NCBI-ProteinID:
XP_023892769
LinkDB
All DBs
Position
Unknown
AA seq
452 aa
AA seq
DB search
MATLSAFSSPPWPNPDPNPNPNPNPNFVDSFSDHSFPLDSDSDSXLPQDPIEPPHSQDPN
PNPNPNPNPTQNPNTQNPFTSPPDSPPSPQPNLLHLSFNQDHGCFAAGTDHGFRIFNCDP
FREIFRRDFISSSTDSAAEESGGGISAVEMLFRCNILALVGGGPHPQYPPNKVMIWDDHQ
SRCIGELSFRSNVRSVRLRRDRIVVVLEQKVYVYNFADLKLLHQIETIANPKGLCAVSQQ
TSSLVLVCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTPDGHLLATASSKGTLVRV
YNTIDGTLLQEVRRGADRAEIYSLAFSSTAQWLAVSSDKGTVHVFSLKVNSASAGNDKPR
SASDPNLAVTQSSTSLSFIRGVLPKYFNSEWSVAQFRLPEGSHYIVAFGHQKNTVVILGM
DGSFYRCQFDTVNGGEMTQLEYHNFLKPEEAF
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggctactctctctgctttctcttctcctccatggccaaacccagatccaaaccctaac
cctaaccctaaccctaattttgttgactccttttctgaccactcttttcctctcgattcc
gactccgattccnccctgccgcaagacccgatcgaacctcctcattctcaggaccccaat
cccaaccctaaccctaaccctaaccctacccagaacccgaacacccaaaacccgttcacc
tcgccgccggattcgccgccatcgccgcagccgaatcttctgcacctctcgttcaaccag
gaccacggttgcttcgcggcgggaacggaccacggcttccggatcttcaactgcgacccg
ttccgcgagatcttccgccgcgatttcatatcctcgtccaccgattccgccgcggaggaa
tccggcggcggcatatccgccgtggagatgctattccgctgtaacatccttgcgctcgtc
ggcggcggacctcaccctcagtacccgccgaacaaggtcatgatctgggacgaccatcag
agcaggtgcatcggcgagctgtcgttccggtcaaacgtgcggtccgtgaggctccggcgt
gatcggatcgtcgtcgttttggagcagaaggtgtacgtgtacaacttcgcggacctcaag
ctccttcaccagatcgagaccattgcgaaccctaagggactctgcgcggtctcgcagcag
accagctcgctcgttctcgtctgcccgggccttcagaagggacaggttcgagtcgagcac
tacgcctcgaagaggaccaagttcatcatggctcacgactccaggatcgcttgctttgca
ctcacccccgacggtcacttgcttgccacggctagctctaaaggcactctggtccgtgtt
tacaatacaattgatggaactttgctccaagaggtaaggaggggtgcagatagggcagag
atctacagtttggcattctcttcaactgcccagtggttagcagtctcaagtgacaaggga
actgtccatgtttttagccttaaggttaattctgcatcagcagggaatgacaagcctcga
agtgcatctgatccaaatcttgctgttacacagtcaagcacatctctctctttcatcaga
ggagttttgcccaagtattttaactcagagtggtcagttgcccagtttcgcttgcctgag
ggttcccattacattgttgctttcggtcaccaaaagaatacagtggtaattcttggcatg
gatgggagcttctatcgctgccagtttgacacggtgaatggaggcgagatgacgcagcta
gaatatcacaactttctgaagccagaagaagccttctga
DBGET
integrated database retrieval system
