Quercus suber (cork oak): 112005009
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Entry
112005009 CDS
T05868
Name
(RefSeq) uncharacterized protein LOC112005009 isoform X1
KO
K24155
rabconnectin-3a
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
112005009
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
qsu04131
]
112005009
Membrane trafficking [BR:
qsu04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
112005009
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
112005009
RAVE complex
112005009
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
Beta-prop_EML
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
EIF3I
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
112005009
NCBI-ProteinID:
XP_023893019
LinkDB
All DBs
Position
Unknown
AA seq
2526 aa
AA seq
DB search
MPDPDQMADPIPGMDPTDHLPLALLPSDPIPPAPTRSFPPGSTIDVLPNMSGYSWVAYAA
SSILVISHFPSPDETLIGPIFRQLLQLSSSAIAAVSWSPVSPSNGDLAAAVDNCIRLFQH
DSATSKGSFCWSQNAVLVQSTKVEAIQWTGSGDGIVAGGIEVVLWRNSGKSWEIAWKLKA
ECPQTLVSATWSIEGPLAAAAYPSELQTEEPRVDVASKCVLVCHMKGKNDYAKTELYHPM
PVSLIQWRPSTGRLLNRDVKRPSRHILLTCCLDGTVRLWCETDNGRVRKIGKETNDHRTM
KRSFCVVAVIEIDQALKGTLGVDVSVLWATEIGGLLKSGDGVNQFFPAEGSEHDEAGRCE
WLVGFGPGMLVYFWAIHCLDDVSPMRFPRVTLWKRQELQGFEVGELRRSSFSNAKDRLLL
NKVFMSRNRLSGPPMICSLIHLLPCDSLVWLLLNTQTLNKMENTSLNKSQTEKYLSCSAT
GILNLGGHAGKIIQVAVYPYSGEVELAVSLDSKGLLLFWSLSTISNCILGRPTLIPTWKL
YGELVTKDSYSKYTCLTWAPSVLDDELVLLMGHIAGIDCFIVRICHNEEENIECHYLFTV
PFTGHGPYEDGPTNIYSNSLSSTCNKTFKYNKFMILGIWMKGFWALSWEITLHSFDLSAS
CCDCNFGTRDAAEGSMWKFESVFAGKRYCLAVNPSSSYLPDPHSHDQVTSFAVVCPGSLT
FEQQKVTSTNDPSCSYPAYIMATGCSNGSLKLWRSNLARPSTLHVPWQLVGMFVAHQGPI
SAICLSGCGQKIATVSTECHPNSVSTLHIWHTVHLTGAGTFMLEDTLFLDKDIVALNWLT
LGNGQLLLGVCLQNELKVYAQRRCGGQTLLNSGKALKMEIWICIAFSHTIPPIHDFLWGP
RAAAVIIHDTYFCVFSQWLFLEHKKHQVEFHLNYNKENCLSCDGRTNEGILSAVFTDYDI
GNFKELSIENGSGECKSGLPIKISKNDYISSNLFVEKVPLILGSGSKLGLWSMLEVVERF
GGSVPSYHPEALFTNIYSGNWKRAYMAVRHLVESLTSNYGSKMETISAKSSVTIPQILLS
NYFEGIFLRNSTDKGFQWSGDLNSTSSQFQSSTNQFAFNSESIASNNIFTSSSTKSELSG
FVKPLENLYELAAINKKEKMQILAIIDLLGEVSNPHASTYESLDEPGRRFWVALRFQQLH
FFQKLGRTASVGELVVDSGMIVWAYHSDCQENLFGAVLANEPSWQEMRAMGVGFWFTNTT
QLRSRIEKLARVQYLKKKDPKDCALLYIALNRLQVLAGLFKISKDEKDKPLVGFLARNFQ
EEKNKAAALKNAYVLMGRHQLELAVAFFLLGGDTYSALSVCVKNLGDEQLALVICRLVEG
HGGPLQHHLITKFLLPSAIEKGDYWLASLLEWELGNYLQSFCIMLGFQINPVTEKSALLS
KHVAFLDPNIGLYCLALAARNSMRNAVGEKNTAVLVRWATLMTVTALKRCGLPLEALECL
SSSQSVLGNTDEESNDAGNFEIPYRILKPSPRDSSNWLSCDVAFQLESLDKLDLALPYFS
KLMREHPSWPDTIIGSAGASTCSKEYNIHQHDKLLQNFQHKLYIGLAQLEQRCSLVPAHI
ISMMLVSLCSHGFLFLGYDILHGYNSQYRSQDESHTVDSFLLYPLLHKPLLKATQEISLL
FSRFITACSISCSQPKSGYIENDVSAESRSKCLDAWGYFFQGLILSLWSLRASLRMISNC
VTQDLIKKPLIFLDLFEYIVHVASAWLQKNSRVLILMVQPLLIMYTNGHMPNEVDMMNLK
KLLPQIAELGAQNLLIDEKAKGLQALNSVPDKKAVDAMHSIPEDERWKIIGACLWQHMAR
FMKQKLDLVFDKVENKLTGSTTEVIRLVSLSLAELLKTTLTNLSSYHVKQVASFLWRKVE
NGLPVMTLIWLKGSSQPHPRVPYEGTVSVDIMKNKDESSISEILWNICVDSEILFEGFAQ
DNINLSHCFDHKPSKAWSDRCMGLGVHETEESNTYDGMISSSSTSSEAGSPARGLFRNGP
TFLSSWQKDTTLKKEVTTFQNPREIYKRNGELLEALCINSIDEGQAALASNRKGILFFNW
EDGMSFSGQSDYIWSEADWPKNGWAGCESTPVPTCVSPGVGLGSKKGLHLGLGGATVGTG
SLAKPGRYLTGGGAFGIPGYAGIGASGLGWEIQQDFEEFVDRPATVENVCTRALSSHPSR
PFFLVGSSNTHIYLWEFGKDKATATYGVLPAAIVPPPYALASISALQFDDCGHRFATAAL
DGTICIWQLEVGGRSNIRPTESSLCFNTHALDVTFISSSGSIIAAAGNSSNGVNVVIWDT
LAPPSTSRASIICHEGGARSLSVFDNDIGSGSVSPLILTGGKDGDVGLHDFRYIATGRTK
RHRHPDNGEQSITSSSIDMRTGDQNRNGMLWYIPKAHLGSITKISTIPNTSLFLTGSKDG
DVKLWDAKRAKLVYHWSKLHERHTFLQPSSRGYGGVVRAAVTDIQVFSHGFLTCGGDGTV
KLVDLK
NT seq
7581 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaccccgaccaaatggcagacccaattccgggcatggatcccaccgaccacctc
ccactcgctctccttccatcggacccaataccacccgccccgacccgatccttcccacct
ggatccaccatagatgtcctcccaaacatgtcaggctactcctgggttgcctacgcggcc
tcctcaatcctcgtgatctcccatttcccttcccccgacgaaaccctaatcggccccatc
ttccgccagctcctccagctctcctcctccgccatcgccgccgtctcctggtcccctgtc
tctccctccaatggcgacctcgccgccgccgtcgacaactgtatccgcctcttccaacat
gattccgccacctccaaaggttctttttgttggagccagaatgcagtacttgtgcaatct
acaaaggtggaggcaatccaatggacgggctccggagatgggatagttgctggtggaatt
gaggtggttttgtggagaaacagtggcaagtcatgggaaattgcttggaagcttaaagca
gagtgtcctcaaactctggtttctgcaacatggtcgattgagggacctttggcagctgca
gcttatcctagtgaactgcagactgaagaaccgagggttgatgtggccagcaaatgtgtg
ttagtatgtcacatgaaaggaaaaaatgattatgcaaaaactgagttgtatcatcctatg
cctgtttcattgattcaatggaggccatcaacaggaagacttttgaacagagatgtaaag
cgtccatcaagacacatactgctaacatgctgcttagatggaacagtaaggttatggtgt
gagactgataatggaagggtcagaaaaattggcaaggagaccaatgatcacagaaccatg
aagcggtctttttgtgtagtcgctgtaatagagatagaccaggccttaaaaggaactctg
ggcgtggatgtatctgtgttgtgggccacagaaattggtggtcttttaaaatctggtgat
ggtgttaatcaatttttccccgcagaaggatctgagcatgatgaggcaggcagatgtgag
tggttagttgggtttggtccaggaatgttggtatatttttgggctattcactgtcttgat
gacgtctccccgatgaggttccctcgagttacattgtggaagagacaagaactacaggga
tttgaagtgggagaacttcgtagaagtagtttttcaaatgctaaagacagattacttctt
aataaagttttcatgtcaaggaatcgcttgtctggtccaccaatgatctgctctttgatt
catttattaccttgtgattctttagtttggttactgttaaatactcaaacattaaataaa
atggagaatacatctcttaataaatcccagacagagaagtatttatcatgttctgctact
ggaattctaaatttaggaggtcatgctggaaaaatcatacaagtcgctgtatatccttat
agcggtgaagttgaattggctgtttctttggattctaagggattgcttcttttttggtca
ctttccaccatttccaactgcatattgggtcgtccaacattgattccaacatggaaactt
tatggagaacttgtaactaaagattcatattccaaatatacatgcttgacgtgggcacct
tcagtattggacgatgaactggttcttcttatgggacatattgctggaattgattgcttt
atagttagaatttgccacaatgaagaagaaaatatagaatgtcactacttattcaccgtt
cctttcactggtcatggtccatatgaggatggtcccacaaatatctattcaaattctttg
tcttcaacttgcaataaaaccttcaagtataataaatttatgattttggggatatggatg
aaaggtttttgggctctgtcatgggaaattactctccattcttttgatttatctgcaagc
tgctgtgactgtaattttggcactagagatgctgcagaaggcagcatgtggaaatttgaa
agtgtttttgctggtaaaagatattgtcttgctgtgaatcctagctcatcatatttacca
gatcctcactcccatgatcaggttacaagttttgctgtggtctgtccaggtagtcttact
tttgaacaacaaaaggtgacttcaactaatgatccttcttgtagttatcctgcatatatt
atggccacaggctgctctaatggttctttaaaactgtggaggagtaaccttgctagaccc
tcaacccttcatgtaccatggcagcttgtaggcatgtttgttgcacatcaaggccccatt
agtgctatatgcttgtctggttgtgggcagaagattgcaaccgtctctacggaatgtcat
ccaaattctgtcagcacccttcatatatggcacactgttcaccttacaggagcaggaact
tttatgttagaagatacattattccttgacaaagatatagttgctttaaattggttaaca
ttaggaaatggtcagttattacttggagtttgcttgcagaatgagttgaaagtatatgct
cagaggcgttgtggtggtcagactttgttgaactctggaaaagctttgaaaatggagata
tggatttgcattgcattttctcatactatccctcccattcacgacttcctttggggaccc
agggctgcagctgtgattattcacgatacttacttctgtgtatttagtcagtggttgttc
cttgagcataaaaaacatcaggttgagttccatctgaattataacaaggaaaattgcctc
agttgtgatggtagaacaaatgagggcattctttctgctgtttttactgattatgatatt
ggtaatttcaaggaattgtcaatcgaaaatggtagtggggaatgcaaatctgggctgcct
ataaagattagtaagaatgattacatatccagcaatttgtttgtggaaaaggttccattg
atacttggttcgggttccaagcttggtttatggagcatgctagaagtagtggagaggttt
ggtggatctgtgcctagctatcaccctgaagcactctttacgaatatatattcaggtaat
tggaaacgtgcatacatggctgtgaggcatcttgttgaatctcttacctctaattatggt
tctaagatggaaactatctctgcaaagtctagcgtcactatcccacagatccttttatca
aattattttgaaggaatttttttgagaaattcaactgataaaggatttcaatggagtgga
gatttgaactcaacatcgtcacagtttcagagcagcacgaaccaatttgcattcaattct
gagtctattgcttccaataatatattcacttcctcttccacaaaatctgaactcagtggc
tttgttaagcctcttgagaacttgtatgagttagcagctataaacaagaaggagaagatg
caaattcttgcaattatagatcttcttggtgaagttagtaacccacacgcttctacctat
gaaagtcttgatgaacctgggcgaaggttttgggtggcattgaggtttcagcaattacat
tttttccaaaaattaggtagaacagcatccgtgggagagttggttgttgactctgggatg
attgtatgggcttaccactctgattgtcaggaaaatttatttggtgctgttctagctaat
gaaccatcttggcaagaaatgcgggcaatgggagttggattttggtttactaatacaaca
caattgcgttcacggatagagaaactagcgagagtacaatatctgaagaagaaagatcct
aaggattgtgcattattatatatagcattgaatagactccaagtgctggctggccttttt
aaaatcagcaaggacgagaaggataagcccttggtgggttttcttgcacgtaattttcag
gaggagaaaaataaggctgctgctttgaagaatgcttatgttttaatggggagacatcag
ctagagctggctgttgctttctttttgcttggaggtgatacatattctgctcttagtgtt
tgtgtaaaaaaccttggggatgagcaacttgcactagtaatttgtcggcttgttgagggg
catggtggaccattacagcaccatctaataacaaagtttttgcttccatcagcaattgag
aaaggcgactactggctagcaagcctgctggagtgggaactggggaattacttgcagtca
ttttgtatcatgcttggtttccagatcaatcctgtgactgaaaagtctgcacttttgtct
aaacatgttgcctttttggacccaaatattggtctttattgcctagcactagccgccaga
aatagcatgagaaatgctgtaggggagaaaaatactgcagttctggttaggtgggcaact
ttgatgacagtcactgccttaaaaagatgtgggcttcctcttgaggctttggagtgcctt
tcttcttcccagagtgtacttgggaatacagatgaagagagtaatgatgctggaaatttt
gaaattccatacaggattttaaagccttctccacgtgattcgtctaactggctttcatgt
gatgtggctttccagctggagtcccttgataaattagatttggcacttccatacttctca
aaactgatgagagagcatccaagttggccagacaccattataggatctgctggagctagt
acatgctccaaggagtataacattcatcaacatgataaattacttcagaacttccagcat
aagttatatatagggcttgcacagttagagcagaggtgctccttggttcctgcccatata
attagcatgatgttagtctcactgtgcagtcatgggttcttgtttcttggatacgatata
ttgcatggttataattctcaatatcggtcacaagatgagagccatacagttgacagtttc
ctcttatatcctcttctgcacaagccacttttgaaggctacccaagaaatttccctctta
ttttcacggtttattactgcctgcagtataagttgctctcaaccaaagtcaggttatatt
gagaatgatgtgtctgctgaaagtaggtctaagtgtttagatgcttgggggtacttcttt
caagggcttatattgtcgttgtggagtttaagagctagtttgagaatgatttccaactgt
gtcacccaagatctcatcaagaaaccccttattttccttgatttatttgagtatatagta
catgttgcatctgcttggcttcagaaaaactcaagagtgctcattctgatggtgcaaccc
ctcttgatcatgtatactaatgggcacatgccaaatgaagttgatatgatgaatttgaag
aaactacttccccagattgcagagttgggggctcagaatctattaatagatgagaaagca
aagggccttcaggctttaaatagtgtgccagataaaaaagctgtagatgctatgcattca
attccagaagatgaaagatggaaaattataggtgcttgtttgtggcaacacatggcgaga
ttcatgaaacagaagctggatttggtgtttgataaagttgaaaataaattgactggcagt
acaacagaagttatcaggctggtctcattgagcttggcagagttactgaagaccacactc
acaaatctttcttcttatcatgtaaaacaggttgcgtcatttctatggcgtaaagtagag
aatggattgccggtaatgactcttatatggttaaaaggatctagccagcctcaccccaga
gtcccctatgagggtactgtaagtgttgatatcatgaaaaacaaagatgagtcttcaatt
tctgaaatactgtggaatatctgcgttgattctgagatattatttgaaggctttgcacaa
gataatataaatttgtcacattgttttgatcataaaccctctaaagcatggagtgataga
tgcatgggtttgggagtacatgaaacagaggaatctaacacttatgatggtatgattagc
agtagttctaccagcagtgaagctggatcaccagctagagggctatttcgtaatggccct
acttttctaagttcctggcagaaagatacaacgcttaaaaaggaggttacaactttccaa
aaccctagagaaatctataagagaaatggggagcttttggaggcattgtgtatcaactct
attgatgaagggcaagctgctcttgctagcaatcgtaagggcatactattttttaattgg
gaagatgggatgtcttttagtggtcagtcagactatatctggtcagaagctgattggcca
aagaatgggtgggctggctgtgaatcaaccccagttccaacatgtgtatctcctggcgtt
ggtctgggaagcaagaaagggttacaccttgggttgggtggagcaactgttggtacaggc
tctttggcaaaacctggcaggtacttgacaggtggtggagcatttgggattccaggttat
gctggtattggtgcctctggcttaggttgggagattcaacaggactttgaggagtttgtt
gatcgaccagctactgtggagaatgtttgcacaagggctctctcaagtcatccctctaga
cctttcttcttggttggttctagtaatacacacatttacttatgggagtttggtaaagat
aaagctactgcaacttatggggtgctgcctgctgcaattgtccctccaccatatgctctt
gcatcaatatcagctttacagtttgacgactgtggacacagatttgctactgctgcctta
gatggaaccatatgcatatggcagctggaggtaggagggaggagtaacattcgtcctaca
gaatcatctctttgcttcaatacccatgcgttggatgtcacttttatctcttcaagcgga
tcaatcattgctgcagctggaaatagctccaatggggttaatgtggttatatgggataca
ttggctccaccttccacctctcgagcttccattatttgtcatgaaggtggtgcccgctcc
ctttctgtgtttgataatgacataggaagtggttctgtttctcctcttattttgactggt
ggtaaagatggtgatgttggactccatgacttccggtacattgctactggtaggactaaa
agacacaggcaccctgataatggtgaacaaagcattacatcttcaagtattgacatgcga
acaggggaccagaatcgaaatgggatgctttggtatataccaaaggctcacttaggaagt
atcaccaaaatatctaccatcccaaatactagtttgttcttaactggaagcaaagatgga
gatgtcaaactttgggatgccaaaagagctaagttagtatatcactggtcgaaattgcat
gaaagacacacctttctgcaaccaagctctcgaggctatggcggagttgttcgggctgct
gttacggatatacaagttttttcacatggttttcttacatgcggtggagatggcactgta
aagctggtagatctcaagtag
DBGET
integrated database retrieval system
