Quercus suber (cork oak): 112005143
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Entry
112005143 CDS
T05868
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112005143
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qsu03021
]
112005143
03036 Chromosome and associated proteins [BR:
qsu03036
]
112005143
Transcription machinery [BR:
qsu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
112005143
Chromosome and associated proteins [BR:
qsu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
112005143
PBAF complex
112005143
GBAF(ncBAF) complex
112005143
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
YEATS
Motif
Other DBs
NCBI-GeneID:
112005143
NCBI-ProteinID:
XP_023893163
LinkDB
All DBs
Position
Unknown
AA seq
533 aa
AA seq
DB search
MSANNNNPPKSLGASSLPFGNAGMPTNPSFTQSQAQAQIEAAFQNQYQLSQAHAIAQAQS
KALAHAQAQAQATHAQFQAHLQAQGLSGIGNLGGSSPSMSTPGNSSIKRMPQKPPIRPLG
VSPTHMVSPLRPMEQFSANRRKKQKLPEKQLQDKVAAILPESALYTQLLEFEARVDAALA
RKKVDIQEALKSPPCVQKTLRIYVFNTFTNQIRTIPKKPNAEAPTWTLKIVGRILEDGVD
PDQPGVVQKSNPLYPKFSSFFKRVTISLDQRLYPDNHVIMWENARTPAPHEGFEVKRKGD
KEFNVNIRLEMNYVPEKFKLSPALMEVLGIEVDTRPRIIGAIWHYVKARKLQNPNDPSFF
NCDPPLQRVFGEERMKFTMVSQKISQHLFPPQPIHLEHKIKLSGNSPAGTACYDVLVDVP
FPIQRELSALLANAEKNKEIDTCDEAICSAIKKIHEHRRRRSFFLGFSQSPVEFINALIE
SQSKDLKLVAGEASRSAEIERRSDFFNQPWVEDAVIRYLNRKPVAGSDAPGSM
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcaaacaataataacccgcctaagagccttggggcctcttcattgccctttggc
aatgctggtatgcccacaaacccttcgtttacacaatcacaagctcaagcacaaattgag
gccgcctttcaaaatcagtatcagctgtcccaagcgcatgctattgcacaggcacagtcg
aaagccttggctcatgctcaagctcaagcacaagcgacacatgcccaattccaagctcat
ttacaagctcaagggctgtcaggcattggtaatttgggtggatcttcaccctccatgtca
actcctggtaattcaagtattaagcggatgccccaaaaacccccgatccgacctcttggt
gtttcccctacacacatggtttcccccttgagaccaatggagcagttttctgccaatcgg
agaaagaagcagaagcttcccgagaaacagctacaagataaagtggcagcgattctgcct
gagtctgctctatatacccagcttcttgaatttgaggctcgtgttgatgctgctctagca
agaaagaaagtcgacatccaagaggcccttaaaagcccaccctgtgtgcagaaaactctt
cgaatttatgtcttcaacacttttacaaaccagattcgcaccattccaaagaagccaaat
gccgaggctcctacttggacgcttaagatagttggtagaatcttggaagatggggtagat
cctgatcagcctggagtggtccaaaagtcaaaccctttgtaccctaaattctcatctttc
ttcaagagagtgaccatttccttggaccagagactatatcctgacaaccatgtcattatg
tgggagaatgctcgaacccctgcacctcacgagggctttgaggtgaagaggaaaggggat
aaagagtttaatgtgaacatacgcttggagatgaactatgtgcctgaaaagttcaagctt
tcaccagcattgatggaagttcttggtattgaggttgatacccgcccgagaataattggt
gcaatctggcattatgtaaaagctagaaaactgcagaacccgaatgacccctctttcttt
aattgtgatccacctcttcaaagagtttttggggaagaaaggatgaaattcaccatggtt
tcacagaagatatcacagcatttattcccacctcagcctatacatttggagcataagatc
aagctttcaggaaatagtcctgccggaactgcctgttatgatgtgttggttgatgtgcct
tttccaattcagagggaattgtctgctctattggctaatgcagagaagaacaaagaaatt
gatacctgtgatgaagcaatatgcagtgctataaaaaagatccatgagcaccgccggagg
cgatcattcttccttgggtttagtcaatcaccggtggaattcatcaatgcattgattgaa
tctcaaagcaaggacttgaaacttgtagctggagaagcaagtcgtagtgctgaaatagag
cgccgttcagatttcttcaaccaaccatgggttgaagatgctgttatccgatatttgaat
cgcaagccagttgcaggaagtgacgctcctggaagtatgtga
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