Quercus suber (cork oak): 112005257
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Entry
112005257 CDS
T05868
Name
(RefSeq) cell differentiation protein rcd1 isoform X1
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112005257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsu03019
]
112005257
Messenger RNA biogenesis [BR:
qsu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
112005257
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
112005257
NCBI-ProteinID:
XP_023893273
LinkDB
All DBs
Position
Unknown
AA seq
330 aa
AA seq
DB search
MAAKLPESLFGSEPTSSMKVRASPSTSGTNNTHGGVHPSRQYYLEQLIVALRNDHTREEA
LHLLYKSCGAHEDYLALLLWHSFETIFVLLKEIIEVYRLISTPELTESVSMRVCNALALL
KCVATHPDTRMPFIKARIPLYIYPLLNNTNKESSHERLRLISLGVIGALVKAGDAEVITF
LIENQIINHCIHCMEVGSVLSKTVATYVVHKILMQDEGLKYCCTFAHRFYALGHALAKMV
ENLPEELSEQQLQLLKHIICCYQRLSESPRACDGLKFCLPTRLRDATAINLLRVDQTTIR
SLEQLVYNVSIGHQSTTKPFGKSLMHLLKG
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggccgcaaaacttccagaatccctgtttgggtcagagccgacatcatcaatgaaagta
agagcgagtccaagtacatcaggaaccaacaacactcatggtggagttcacccctcaaga
cagtactacttggaacagttgattgttgctcttcgcaatgatcatacccgagaggaagct
cttcacctcctatacaagtcttgtggagctcatgaagattatttagctctattgttatgg
cattcctttgaaacaatattcgtactcttaaaggaaataattgaagtataccgcttaata
tcaaccccagagcttacagaaagtgtatcaatgcgcgtatgcaatgctcttgctctgctt
aagtgtgtagctactcacccagatacaaggatgccgtttatcaaggctagaataccacta
tatatataccctcttcttaacaatacgaacaaggaatcgtctcatgaacgtttacggctt
atcagcttaggtgttattggtgccttagtgaaggctggagatgcagaagttattactttc
cttattgaaaatcaaataatcaatcattgcatacactgcatggaggtgggcagtgtattg
tcaaaaacagttgccacatatgttgttcataaaattctaatgcaagatgaggggctgaag
tattgctgtacttttgcacatcgattttatgcactaggccatgctttggcaaagatggta
gagaatcttcctgaggaactctcagaacaacagctacagctgctaaaacatattatctgt
tgctaccaaaggctctcagaaagtccaagggcgtgtgatggtttaaaattctgccttccc
acaaggttaagagatgctactgccatcaacctcctacgtgttgaccaaacaaccataagg
tcgctggaacaattagtttacaatgtctcgatcggacaccaatctacaacaaaaccgttt
ggaaagtcacttatgcacttgcttaaaggctaa
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