Quercus suber (cork oak): 112005529
Help
Entry
112005529 CDS
T05868
Name
(RefSeq) vacuolar protein-sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
112005529
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
qsu04131
]
112005529
Membrane trafficking [BR:
qsu04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
112005529
Hops complex
112005529
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS11_N
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_C
Clathrin
TPR_Vps41
zf-C3H2C3
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_1st
zf_RING_Vps8_fungal
zf-C3HC4_2
WD40_WDHD1_1st
Beta-prop_EML
TPR_11
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
112005529
NCBI-ProteinID:
XP_023893560
LinkDB
All DBs
Position
Unknown
AA seq
962 aa
AA seq
DB search
MYQWRKFEFFEEKNAGKLNKISPPSSSEEENSAAVKIECCSSGRGKVVIGYDDGTISLLD
RGLNFNFSFHGHSSSVLFLQHLKQRNFLVTIGEDEQISPQQSSMCLKVFDLDKMHQPEAT
STSTSSTTPDCIGILRIFTNQFPQAKITSFLVLEEVPPILLIAIGLDNGCIYCIKGDIGR
ERITRFRLAVDDNRSSSNSITGLGFRVDGQALQLFAVTPVSVTLFNLQDQPPRRQTLDHI
GSSVYSVTMSDRAELIIGRPEAVYFYEVDGRGPCWAFEGEKKFLGWFRGYLLCVIADQRN
GKHTFNVYDLKNRLIAHSIVVKEVTHMLCEWGNIILIMADKSALCIGEKDMESKLDMLFK
KNLYTVAINLVQSQQADAAATAEVLRKYGDHLYSKQDYDEAMAQYINTIGHLEPSYVIQK
FLDAQRIYNLTNYLEKLHEKGLASKDHTTLLLNCYTKLKDVEKLNIFIKSEDGVGEQKFD
VETAIRVCRAANYHEHAMYVAKKAGRHELYLKILLEDLGRYDEALHYISGLEPSQAGVTV
KEYGKILIEHKPVETIEILMRLCTEDKESVKRGASSAYISMLPSPVDFLNIFIHHPESLM
DFLEKYTTKVKDSPAQVEIHNTLLELYLSNDLNFPSISQANNNEDLNLRAVGKLVADGKD
STKETDCLERRDKGLHLLKGAWPSELEHPLYDVDLAIILCEMNAFSEGLLYLYEKMKLYK
EVIACYMQAHDHEGLIGCCKRLGDSVKGGDPSLWADLLKYFGELGEDCSKEVKEVLTYIE
RDDILPPIIVLQTLSKNPCLTLSVIKDYIARKLEQESKLIEEDRRAIEKYQEDTLAMRKE
VQDLRTNARIFQLSKCTACTFTLDLPAVHFMCMHSFHQRCLGDNEKECPECAPEYRSVLE
MKRSLEQNSRDQDQFFQQVKSSKDGFSVIAEYFGKGIISKTSNGSTGAGALGSANTSSGS
GL
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgtaccagtggaggaaattcgaattcttcgaggagaaaaacgccgggaaattaaacaaa
atatcgccgccgtcttcgtcggaggaagagaattcggccgccgtcaaaatcgaatgctgt
tcaagcggaagaggcaaagtagtgatcggctacgacgacggcacaatcagcctcctcgat
cgcggcctcaacttcaatttctccttccacggtcactcttcctccgtcctctttctccaa
cacctcaagcaacggaactttctagtgacgatcggagaagatgaacaaatttcgccgcaa
caatcctcaatgtgtctcaaggttttcgatctcgacaaaatgcatcagccagaggccaca
agcacaagcacaagctccaccactccggattgtattggaatcttacgaattttcactaat
cagttccctcaagccaagattacttcgtttttagtgttagaggaagtgccgccgattttg
cttatagctattggattagataatggttgtatctactgtatcaaaggtgacattggacgt
gagcgtataactcgttttaggcttgcagttgatgataaccggtcgtcatcaaactcgata
actggtttaggtttcagagtggatggtcaagcacttcaattatttgctgttactccggtt
tcggttaccttgtttaatttgcaagatcaaccgcctagacgacaaaccctagatcatatt
ggatctagtgtttatagtgttacaatgagtgaccgcgcggagttgataattggtcggcca
gaagcagtgtatttttacgaagtggatgggcgtggtccgtgttgggcttttgaaggagag
aagaaattcttggggtggttccgtggttacctattatgtgtgattgcagatcagagaaat
ggtaagcatacgttcaatgtttatgacttgaagaaccgtttgattgcacatagtatagtg
gttaaagaggttactcatatgctttgtgaatggggtaatatcatacttataatggctgac
aaatcggctttgtgtatcggggagaaggatatggaaagcaagttagatatgctgtttaag
aaaaacctttatactgtggctataaatcttgttcaaagccagcaagctgatgcggcagca
actgcagaggtgttaagaaagtatggggatcatttgtatagcaagcaagactatgatgag
gctatggcccaatatattaatactatcggtcatcttgaaccttcatatgtgatacagaag
ttcttagatgcacagagaatctacaaccttaccaactacttggagaagttacatgagaag
gggcttgcttctaaagaccatacaactttgctcttgaactgttacacgaaattgaaagat
gttgaaaagctaaatatatttattaaaagtgaggatggtgttggagagcaaaagtttgat
gtggaaactgcaataagggtttgccgtgctgctaattatcatgagcatgcaatgtatgtt
gcaaagaaggcagggaggcacgaattgtacttaaagatcttacttgaagaccttggtaga
tatgatgaagccttgcactatatttcaggccttgagccaagtcaagcaggtgtgacggtg
aaggagtatggtaaaattctcatagagcacaagccagtggagacaattgagatactcatg
agactttgcacagaggataaagaatcagtcaagcgaggagcttcaagtgcatacatatct
atgttgccatctcctgttgattttctcaacattttcatccatcatccagaatcccttatg
gattttcttgaaaaatataccaccaaggtaaaagactcgcctgctcaagttgaaatccac
aacacactgttggagttatacttgtccaatgacttgaactttccatccatctcacaagct
aacaacaatgaagatcttaatcttagagctgttgggaaattggttgctgatggcaaagat
tcaactaaggaaacagattgtctggaaaggcgtgacaagggcctgcatttgcttaagggt
gcatggccatctgagctagaacatccactttatgatgttgatttagctatcattctttgt
gaaatgaatgcatttagcgaagggctgttgtacttatatgaaaagatgaaactctacaaa
gaggtgattgcttgctatatgcaggcacatgaccatgagggattaattggatgctgcaaa
aggttgggggattcagttaaaggaggtgacccatctctttgggctgatctgctgaagtat
tttggtgaacttggagaagattgctctaaagaagtgaaggaagttttgacctatatcgaa
agggatgacatcttgcctcctatcattgttcttcaaacgttatccaaaaatccatgcctc
acactctctgtcattaaggattatatagctcgaaagcttgaacaagaatcaaagcttatt
gaagaggaccggcgagctattgagaagtatcaggaagacactctggcaatgagaaaagaa
gttcaggatctcaggacaaatgccagaatatttcagcttagcaagtgcactgcatgcact
ttcacacttgatctccctgctgtacattttatgtgtatgcactcattccatcagcgttgc
cttggggataatgaaaaagaatgtcctgagtgtgctcctgaatatagatctgttctggaa
atgaagagaagcttggagcagaattctagagaccaggatcagttctttcagcaagtgaag
agttcaaaggatggattttctgtgattgctgagtattttggaaagggaatcataagcaaa
acaagtaatggatccacaggtgcaggtgctcttggatcagccaacacttcttccggcagt
ggcctctaa
DBGET
integrated database retrieval system
