Quercus suber (cork oak): 112006225
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Entry
112006225 CDS
T05868
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
qsu
Quercus suber (cork oak)
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
112006225
Enzymes [BR:
qsu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
112006225
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
BsuPI
Motif
Other DBs
NCBI-GeneID:
112006225
NCBI-ProteinID:
XP_023894288
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All DBs
Position
Unknown
AA seq
681 aa
AA seq
DB search
MEKVNRIWKWGSLVGCLGVIFLFVFLLADSSEKTPLRRLLSSKRNVREPNLDVKLITHDR
EQVVVNNGIVRVILSRPDGHVLGIQYNGIDNLLDRENEEYDRGYLDVVWNEPGKLGVFER
TRGTIFRVITANKDQVELSFTSKWNSSLREKVPFIVDKRYIFRRNVSGYYFYAIFERPEG
WPKVEVDQIRIVYKLHQDKFRFMAVSDSMQRIMPSAEDRAKGEPLAYPEAVLLTNTSNPK
LRGEVDDKYQYSVENKDNKVHGWICEDDPAVGFWMITPSNEFRTSGPNKQDLTSHVGPTN
LNMFVSTHYAGKEVGMKFAEGEQWKKVFGPSFIYLNKVSKGEDPLELWSDAKVKMLNEVN
SWPYNFTQSKDYPTSDQRGSVAGQLLVRDRYINERLMWAQLAYIGLAAPGEEGSWQRESK
GYQFWTQADKEGHFEIKNVHPGDYNLYAWVPGFIGDYKADTKITITAGGKLQLGTLKYRP
PRQGPTLWEIGIPDRTAAEFYVPNPYATLLNSLYTTTTSDNYRQYGLWERYSDIYRNQDL
IYTVNVSDYSKDWFFAHVNRRTNNRTYEATTWQIHFEIETVYNNGNYTLRLALASATNAE
LQVRFNDATAYPPHFSTGVMGGDNAIARHGIHGLYWLYNIDVASNLLQEGKNIIYLRQSR
STNQFQGVMYDYLRLEGPPEN
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggtaaaccggatttggaaatggggatctctcgttggctgcttaggagtgatt
ttcctgtttgtgttcttgcttgctgattcttcggagaagaccccattgaggagacttcta
tcatcaaaacgcaatgtccgcgaaccaaatcttgatgtaaaactgattacccacgatcgt
gagcaggtggtggtgaataatggcatcgtgcgagtcattttgtcgaggcctgacggtcat
gtcttgggaatacagtacaatggaatagataatttacttgacagagaaaatgaagaatat
gatagagggtatttggatgttgtatggaacgaaccaggaaaacttggtgtatttgagaga
acaagaggaacaatatttagagtaataactgcgaacaaagaccaagtagaactttcattt
acttccaaatggaatagttcgctccgtgaaaaagttcctttcattgtagacaaaaggtac
atattccggcgtaacgtttcgggatattatttctacgcaatatttgagcgccctgaagga
tggcctaaggttgaagtggatcaaattaggattgtttacaagctccatcaagacaaattt
cggttcatggcggtatccgacagtatgcagaggatcatgccatcggcggaagaccgcgcc
aagggtgagcccctcgcttaccctgaagctgttcttttgaccaatacaagcaatcctaaa
ttaagaggagaggtggatgacaagtaccagtactcggtggagaacaaagacaataaggtt
catgggtggatatgcgaagatgacccagccgtgggattctggatgatcacacccagcaat
gagtttcgtacttcgggtcccaacaagcaagacctcacttcccatgtgggccccactaac
ctcaatatgttcgtgagtactcactatgctgggaaggaagtagggatgaaatttgcagag
ggtgagcaatggaaaaaggtttttggtccttcatttatatatcttaacaaggtttccaaa
ggagaagatccccttgagctttggtcagatgctaaagtgaagatgcttaatgaagtcaat
agctggccatacaatttcacccaatcgaaagattatcctacttctgaccaacgtggaagt
gttgcgggtcaattgctagtccgtgacaggtacattaacgagagactaatgtgggcacaa
ttagcttatattggtttggctgctcctggagaggagggatcttggcaaagagaaagcaag
ggttatcaattttggacccaagccgacaaggagggccatttcgaaattaaaaatgtccat
cccggggactataatttgtacgcatgggtccctggcttcataggggattacaaagctgat
accaagattactattacggcaggtgggaaactacaattgggaacccttaaatataggcct
ccaagacaaggtcctaccctgtgggaaattggcatccctgaccgcaccgcggctgagttc
tatgtaccaaacccatatgcaacactcctgaacagcttgtacaccaccacaacatctgac
aattacaggcaatatggcttgtgggaaaggtattcagatatataccgtaatcaggatctt
atctacactgttaatgtcagtgattatagtaaagattggttcttcgctcatgttaacagg
cgtacaaataatcggacatacgaagcaactacgtggcagattcattttgaaattgaaact
gtgtacaacaatggaaactacacactccggttggccttggcttcagccactaacgctgaa
ttgcaggttcggttcaacgatgccacagcctatcctcctcacttttcaacaggggttatg
ggcggggacaacgccatcgcaaggcatggaattcatgggctatattggttgtacaacatt
gatgtagcaagcaatctactccaggaaggaaagaacataatctatctcagacagtcaagg
agcacgaatcaatttcaaggagtcatgtatgactaccttcgtctagaagggcctcctgaa
aattga
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